RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 METTL8Q9H825 291 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 SIRT7Q9NRC8 400 aa14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 RASL12Q9NYN1 266 aa14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 RNF114Q9Y508 228 aa14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 MAB21L2Q9Y586 359 aa14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 TRBV23-1A0A0A0MS06 115 aa14.1□□□□□ -0.15
VPS9D1-203ENST00000563798 NPFFO15130 113 aa14.1□□□□□ -0.15
VPS9D1-203ENST00000563798 DNAJC8O75937 253 aaPredicted RBP14.1□□□□□ -0.15
VPS9D1-203ENST00000563798 PSG2P11465 335 aa14.1□□□□□ -0.15
VPS9D1-203ENST00000563798 DAPP51397 102 aa14.1□□□□□ -0.15
VPS9D1-203ENST00000563798 KRTAP10-3P60369 221 aa14.1□□□□□ -0.15
VPS9D1-203ENST00000563798 ACSM1Q08AH1 577 aa14.1□□□□□ -0.15
VPS9D1-203ENST00000563798 ZNF829Q3KNS6 432 aaPredicted RBP14.1□□□□□ -0.15
VPS9D1-203ENST00000563798 Q6ZSR3 168 aa14.1□□□□□ -0.15
VPS9D1-203ENST00000563798 OR51E1Q8TCB6 317 aa14.1□□□□□ -0.15
VPS9D1-203ENST00000563798 H1FXQ92522 213 aaKnown RBP14.1□□□□□ -0.15
VPS9D1-203ENST00000563798 MNTQ99583 582 aa14.1□□□□□ -0.15
VPS9D1-203ENST00000563798 GPR84Q9NQS5 396 aa14.1□□□□□ -0.15
VPS9D1-203ENST00000563798 VPREB3Q9UKI3 123 aa14.1□□□□□ -0.15
VPS9D1-203ENST00000563798 COPS3Q9UNS2 423 aa14.1□□□□□ -0.15
VPS9D1-203ENST00000563798 PSMD9O00233 223 aa14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 GSC2O15499 205 aa14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 PRKYO43930 277 aa14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 NOS1APO75052 506 aaPredicted RBP14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 MTRF1O75570 445 aaKnown RBP14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 DHRS3O75911 302 aa14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 TSPAN9O75954 239 aa14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 TTRP02766 147 aa14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 RIDAP52758 137 aaKnown RBP14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 GMFBP60983 142 aa14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 CEP78Q5JTW2 689 aa14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 AADACL4Q5VUY2 407 aa14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 TMEM42Q69YG0 159 aa14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 MEPCEQ7L2J0 689 aaKnown RBP14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 THAP5Q7Z6K1 395 aa14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 DUS3LQ96G46 650 aaKnown RBP14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 CNN2Q99439 309 aaKnown RBP14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 PRRG3Q9BZD7 231 aa14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 MOB1AQ9H8S9 216 aa14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 ENPP5Q9UJA9 477 aa14.09□□□□□ -0.15
VPS9D1-203ENST00000563798 TIMM23O14925 209 aa14.08□□□□□ -0.16
VPS9D1-203ENST00000563798 TFF1P04155 84 aa14.08□□□□□ -0.16
VPS9D1-203ENST00000563798 MRPL3P09001 348 aaKnown RBP14.08□□□□□ -0.16
VPS9D1-203ENST00000563798 BLMHQ13867 455 aa14.08□□□□□ -0.16
VPS9D1-203ENST00000563798 NXNL2Q5VZ03 156 aa14.08□□□□□ -0.16
VPS9D1-203ENST00000563798 BRICD5Q6PL45 260 aa14.08□□□□□ -0.16
VPS9D1-203ENST00000563798 Q6ZSV7 163 aa14.08□□□□□ -0.16
VPS9D1-203ENST00000563798 POC1AQ8NBT0 407 aa14.08□□□□□ -0.16
VPS9D1-203ENST00000563798 ZNRF1Q8ND25 227 aa14.08□□□□□ -0.16
VPS9D1-203ENST00000563798 OR5R1Q8NH85 324 aa14.08□□□□□ -0.16
VPS9D1-203ENST00000563798 OR5K1Q8NHB7 308 aa14.08□□□□□ -0.16
VPS9D1-203ENST00000563798 PPP1R14AQ96A00 147 aa14.08□□□□□ -0.16
VPS9D1-203ENST00000563798 SEMA6AQ9H2E6 1030 aa14.08□□□□□ -0.16
VPS9D1-203ENST00000563798 FAM53CQ9NYF3 392 aa14.08□□□□□ -0.16
VPS9D1-203ENST00000563798 PIGLQ9Y2B2 252 aa14.08□□□□□ -0.16
VPS9D1-203ENST00000563798 BTBD17A6NE02 478 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 SLC22A31A6NKX4 558 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 DHRS7CA6NNS2 312 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 ZAR1LA6NP61 321 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 NRASP01111 189 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 FAHP16930 419 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 NDUFB7P17568 137 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 SAA4P35542 130 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 TGFBR2P37173 567 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 GABRA2P47869 451 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 ACTR3P61158 418 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 MFGE8Q08431 387 aaPredicted RBP14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 KLRD1Q13241 179 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 MIDNQ504T8 468 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 SLX4IPQ5VYV7 408 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 C12orf73Q69YU5 71 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 ASPHD2Q6ICH7 369 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 HCP5Q6MZN7 132 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 HAGHLQ6PII5 290 aaPredicted RBP14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 ZNF322Q6U7Q0 402 aaPredicted RBP14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 ACP7Q6ZNF0 438 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 MOB3CQ70IA8 216 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 ELMOD2Q8IZ81 293 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 BEND2Q8NDZ0 799 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 OR5D13Q8NGL4 314 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 TMEM163Q8TC26 289 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 BCAS4Q8TDM0 211 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 CADM1Q9BY67 442 aaKnown RBP14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 ADGRL4Q9HBW9 690 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 SF3B6Q9Y3B4 125 aaKnown RBP14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 V9GYS6 101 aa14.07□□□□□ -0.16
VPS9D1-203ENST00000563798 VWFP04275 2813 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 A0A1B0GTI1 187 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 A0A1W2PQ09 198 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 M0QZ24 198 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 DLGAP1O14490 977 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 DYNC1I1O14576 645 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 PGA5P0DJD9 388 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 DLX1P56177 255 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 CXCR4P61073 352 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 EGR3Q06889 387 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 ATP6AP1Q15904 470 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 SMIM21Q3B7S5 101 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 CLVS2Q5SYC1 327 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 ZNF684Q5T5D7 378 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms