RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 CACNA1DQ01668 2161 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 CLDN25C9JDP6 229 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 APOA1P02647 267 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 UNC119Q13432 240 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 MADCAM1Q13477 382 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 OR8G1Q15617 311 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 ADIPOQQ15848 244 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 DTX3Q8N9I9 347 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 OR8S1Q8NH09 359 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 PPP1R14BQ96C90 147 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 CPNE2Q96FN4 548 aaPredicted RBP8.66□□□□□ -1.02
SMG1-208ENST00000563448 ABCG5Q9H222 651 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 CYSLTR2Q9NS75 346 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 TAAR3PQ9P1P4 343 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 EXTL2Q9UBQ6 330 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 ADAM30Q9UKF2 790 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 RNF115Q9Y4L5 304 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 V9GYH0 126 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 ZNF462Q96JM2 2506 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 IGKV1-12A0A0C4DH73 117 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 OR5B21A6NL26 309 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 TMEM14DPA8MWL7 114 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 ANGPTL7O43827 346 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 PLATP00750 562 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 IGKV1D-12P01611 117 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 HAAOP46952 286 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 CAPZA1P52907 286 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 ART1P52961 327 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 GNG3P63215 75 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 ZNF45Q02386 682 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 PDZK1IP1Q13113 114 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 ZNF846Q147U1 533 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 ASCL4Q6XD76 172 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 OR4M1Q8NGD0 313 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 OR10AD1Q8NGE0 317 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 OR10K1Q8NGX5 313 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 OR13G1Q8NGZ3 307 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 MICU1Q9BPX6 476 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 SOSTQ9BQB4 213 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 TMEM204Q9BSN7 226 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 RTL8AQ9BWD3 113 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 SLC22A4Q9H015 551 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 HMG20AQ9NP66 347 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 RHBDL2Q9NX52 303 aa8.65□□□□□ -1.02
SMG1-208ENST00000563448 ANKHD1Q8IWZ3 2542 aaKnown RBP8.65□□□□□ -1.03
SMG1-208ENST00000563448 A0A1W2PP11 408 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 ZSCAN5BA6NJL1 495 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 F5H5P2 479 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 OR4A8P0C604 315 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 UBBP0CG47 229 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 TMEM225BP0DP42 221 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 MAB21L1Q13394 359 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 FAM76BQ5HYJ3 339 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 SPANXN2Q5MJ10 180 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 ZNF611Q8N823 705 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 TMEM104Q8NE00 496 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 FAM46BQ96A09 425 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 PTX4Q96A99 478 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 WDR12Q9GZL7 423 aaKnown RBP8.64□□□□□ -1.03
SMG1-208ENST00000563448 OR51I2Q9H344 312 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 PLK3Q9H4B4 646 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 GHRLQ9UBU3 117 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 FBLN5Q9UBX5 448 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 NOP16Q9Y3C1 178 aaKnown RBP8.64□□□□□ -1.03
SMG1-208ENST00000563448 FAM208BQ5VWN6 2430 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 ROS1P08922 2347 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 FABP12A6NFH5 140 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 J3QRK9 145 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 CDC14BO60729 498 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 CTAG2O75638 210 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 RAB6AP20340 208 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 SERPINA2P20848 420 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 SELENOVP59797 346 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 ZNF79Q15937 498 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 SLC22A6Q4U2R8 563 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 METAP1DQ6UB28 335 aaPredicted RBP8.64□□□□□ -1.03
SMG1-208ENST00000563448 FAM131AQ6UXB0 335 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 SLC25A26Q70HW3 274 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 OR2W3Q7Z3T1 314 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 PXT1Q8NFP0 134 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 OR2Z1Q8NG97 314 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 FAM222BQ8WU58 562 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 RAB40AQ8WXH6 277 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 S100A13Q99584 98 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 METTL9Q9H1A3 318 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 CXXC4Q9H2H0 198 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 BANF2Q9H503 90 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 RAB22AQ9UL26 194 aa8.64□□□□□ -1.03
SMG1-208ENST00000563448 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.63□□□□□ -1.03
SMG1-208ENST00000563448 SYNGR1O43759 233 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 MPIG6BO95866 241 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 APOBEC3AP31941 199 aaPredicted RBP8.63□□□□□ -1.03
SMG1-208ENST00000563448 RANBP1P43487 201 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 ZNF154Q13106 437 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 ZNF672Q499Z4 452 aaPredicted RBP8.63□□□□□ -1.03
SMG1-208ENST00000563448 HAGHLQ6PII5 290 aaPredicted RBP8.63□□□□□ -1.03
SMG1-208ENST00000563448 ZNF573Q86YE8 665 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 C11orf53Q8IXP5 236 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 SPERTQ8NA61 448 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 ZSCAN4Q8NAM6 433 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms