RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 FAM192AQ9GZU8 254 aa3.8□□□□□ -1.8
LINC00254-201ENST00000563416 OR51I1Q9H343 314 aa3.8□□□□□ -1.8
LINC00254-201ENST00000563416 SDHAF3Q9NRP4 125 aa3.8□□□□□ -1.8
LINC00254-201ENST00000563416 UBQLN4Q9NRR5 601 aa3.8□□□□□ -1.8
LINC00254-201ENST00000563416 MBD2Q9UBB5 411 aa3.8□□□□□ -1.8
LINC00254-201ENST00000563416 FAM215AQ9Y5M1 114 aa3.8□□□□□ -1.8
LINC00254-201ENST00000563416 KCNE3Q9Y6H6 103 aa3.8□□□□□ -1.8
LINC00254-201ENST00000563416 TEX15Q9BXT5 2789 aa3.8□□□□□ -1.8
LINC00254-201ENST00000563416 CSMD2Q7Z408 3487 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 DSPPQ9NZW4 1301 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 A0A096LPI6 279 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 A0A0A6YYD4 124 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 HMGN4O00479 90 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 RFXANKO14593 260 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 IMPA2O14732 288 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 STX11O75558 287 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 UGT2B17O75795 530 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 TRAPPC6AO75865 159 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 CPSF4O95639 269 aaKnown RBP3.79□□□□□ -1.8
LINC00254-201ENST00000563416 ZNF708P17019 499 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 ZNF17P17021 662 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 RPS4Y1P22090 263 aaKnown RBP3.79□□□□□ -1.8
LINC00254-201ENST00000563416 LAP3P28838 519 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 FCGR2CP31995 323 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 RFX3P48380 749 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 LHX2P50458 406 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 NDUFV3P56181 108 aaKnown RBP3.79□□□□□ -1.8
LINC00254-201ENST00000563416 CLDN18P56856 261 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 ZNF117Q03924 483 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 BNIP1Q12981 228 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 FADDQ13158 208 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 ART3Q13508 389 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 SLC17A1Q14916 467 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 CD226Q15762 336 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 ZNF141Q15928 474 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 BCL2A1Q16548 175 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 PCK2Q16822 640 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 ZNF630Q2M218 657 aaPredicted RBP3.79□□□□□ -1.8
LINC00254-201ENST00000563416 PLPPR5Q32ZL2 321 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 GLYR1Q49A26 553 aaPredicted RBP3.79□□□□□ -1.8
LINC00254-201ENST00000563416 CCNJQ5T5M9 372 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 C1orf185Q5T7R7 199 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 METTL21CQ5VZV1 264 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 XKRXQ6PP77 449 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 ENPP6Q6UWR7 440 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 NCCRP1Q6ZVX7 275 aaPredicted RBP3.79□□□□□ -1.8
LINC00254-201ENST00000563416 GALNT10Q86SR1 603 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 MARCH3Q86UD3 253 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 TGIF2LXQ8IUE1 241 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 MSRB3Q8IXL7 192 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 RPRMLQ8N4K4 120 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 TRIML2Q8N7C3 387 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 ACBD4Q8NC06 268 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 STXBP6Q8NFX7 210 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 OR4K17Q8NGC6 315 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 ZPLD1Q8TCW7 415 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 GTF2H4Q92759 462 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 RAB8BQ92930 207 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 DLX4Q92988 240 aaPredicted RBP3.79□□□□□ -1.8
LINC00254-201ENST00000563416 ROPN1LQ96C74 230 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 SH3YL1Q96HL8 342 aaPredicted RBP3.79□□□□□ -1.8
LINC00254-201ENST00000563416 ITCHQ96J02 903 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 ZNF317Q96PQ6 595 aaPredicted RBP3.79□□□□□ -1.8
LINC00254-201ENST00000563416 TTYH2Q9BSA4 534 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 UGT2B28Q9BY64 529 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 TBL1XR1Q9BZK7 514 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 SLC38A1Q9H2H9 487 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 DSN1Q9H410 356 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 PTGES2Q9H7Z7 377 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 EXD2Q9NVH0 621 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 FGFR1OP2Q9NVK5 253 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 CCDC167Q9P0B6 97 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 GNG12Q9UBI6 72 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 IFT52Q9Y366 437 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 CHTOPQ9Y3Y2 248 aaKnown RBP3.79□□□□□ -1.8
LINC00254-201ENST00000563416 L3MBTL1Q9Y468 752 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 KLF2Q9Y5W3 355 aaPredicted RBP3.79□□□□□ -1.8
LINC00254-201ENST00000563416 AUP1Q9Y679 476 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 ABCA4P78363 2273 aa3.79□□□□□ -1.8
LINC00254-201ENST00000563416 DSCAMO60469 2012 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 A0A0G2JND7 137 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 A0A1W2PP18 115 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 NPIPA7E9PJI5 369 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 EI24O14681 340 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 EIF4E2O60573 245 aaKnown RBP3.78□□□□□ -1.8
LINC00254-201ENST00000563416 KRT75O95678 551 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 ECDO95905 644 aaPredicted RBP3.78□□□□□ -1.8
LINC00254-201ENST00000563416 EPPINO95925 133 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 NPIPA8P0DM63 369 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 OR12D1P0DN82 309 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 TROVE2P10155 538 aaKnown RBP eCLIP3.78□□□□□ -1.8
LINC00254-201ENST00000563416 FOLR2P14207 255 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 HPGDP15428 266 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 CD1EP15812 388 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 ELK4P28324 431 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 GCKP35557 465 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 P2RX1P51575 399 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 CRYBA2P53672 197 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 NUP107P57740 925 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 SEC61GP60059 68 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms