RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ANKRD61A6NGH8 418 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 OOEPA6NGQ2 149 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 OR5B21A6NL26 309 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 H0YHG0 523 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 PHF1O43189 567 aaPredicted RBP7.12□□□□□ -1.27
UBR1-204ENST00000563239 GYPAP02724 150 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 DUX4L2P0CJ85 424 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 DUX4L3P0CJ86 424 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 DUX4L4P0CJ87 422 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 DUX4L5P0CJ88 424 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 DUX4L6P0CJ89 424 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 DUX4L7P0CJ90 424 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 MYF6P23409 242 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 CPT2P23786 658 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 C21orf33P30042 268 aaPredicted RBP7.12□□□□□ -1.27
UBR1-204ENST00000563239 LCN2P80188 198 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 ST3GAL4Q11206 333 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 C6orf141Q5SZD1 244 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 DUX4L9Q6RFH8 374 aaPredicted RBP7.12□□□□□ -1.27
UBR1-204ENST00000563239 RNF144BQ7Z419 303 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 GLCCI1Q86VQ1 547 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 CCDC54Q8NEL0 328 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 BPIFB6Q8NFQ5 453 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 OR10Z1Q8NGY1 313 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 AQP3Q92482 292 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 SGCDQ92629 289 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 MRPL48Q96GC5 212 aaKnown RBP7.12□□□□□ -1.27
UBR1-204ENST00000563239 HIST1H2AAQ96QV6 131 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 PDCD1LG2Q9BQ51 273 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 TMPRSS13Q9BYE2 586 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 ANKRD60Q9BZ19 345 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 CHST5Q9GZS9 411 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 PAK1IP1Q9NWT1 392 aaPredicted RBP7.12□□□□□ -1.27
UBR1-204ENST00000563239 CNOT2Q9NZN8 540 aaKnown RBP7.12□□□□□ -1.27
UBR1-204ENST00000563239 ERVK-18Q9QC07 812 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 DUX4Q9UBX2 424 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 MIOXQ9UGB7 285 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 OPN4Q9UHM6 478 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 PCDHB10Q9UN67 800 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 CAB39Q9Y376 341 aaPredicted RBP7.12□□□□□ -1.27
UBR1-204ENST00000563239 EXOSC1Q9Y3B2 195 aaKnown RBP7.12□□□□□ -1.27
UBR1-204ENST00000563239 PCDHGB5Q9Y5G0 923 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 ARHGAP32A7KAX9 2087 aa7.12□□□□□ -1.27
UBR1-204ENST00000563239 TRAV38-1A0A0B4J264 116 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 PPIAL4CA0A0B4J2A2 164 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 IRGMA1A4Y4 181 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 EFCAB10A6NFE3 127 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 OGG1O15527 345 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 AKR7A2O43488 359 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 SYNGR1O43759 233 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 FOXH1O75593 365 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 TFF1P04155 84 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 RPS2P15880 293 aaKnown RBP7.11□□□□□ -1.27
UBR1-204ENST00000563239 MPZP25189 248 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 GBX2P52951 348 aaPredicted RBP7.11□□□□□ -1.27
UBR1-204ENST00000563239 MRPL28Q13084 256 aaKnown RBP7.11□□□□□ -1.27
UBR1-204ENST00000563239 CDK5R1Q15078 307 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 STUMQ69YW2 141 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 ASPHD2Q6ICH7 369 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 HAGHLQ6PII5 290 aaPredicted RBP7.11□□□□□ -1.27
UBR1-204ENST00000563239 CRIP3Q6Q6R5 217 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 IZUMO2Q6UXV1 221 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 KCTD8Q6ZWB6 473 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 UTS2BQ765I0 119 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 ANGPTL5Q86XS5 388 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 CALHM1Q8IU99 346 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 FGFRL1Q8N441 504 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 OR52N1Q8NH53 320 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 GATAD2BQ8WXI9 593 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 FGGYQ96C11 551 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 C10orf35Q96D05 121 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 NEIL1Q96FI4 390 aaPredicted RBP7.11□□□□□ -1.27
UBR1-204ENST00000563239 ZNF488Q96MN9 340 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 RASSF4Q9H2L5 321 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 SMURF1Q9HCE7 757 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 BABAM2Q9NXR7 383 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 KAAG1Q9UBP8 84 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 CDC42EP3Q9UKI2 254 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 HHLA2Q9UM44 414 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 LRCH1Q9Y2L9 728 aa7.11□□□□□ -1.27
UBR1-204ENST00000563239 TRBV2A0A0J9YWF9 115 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 TMEM212A6NML5 194 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 C22orf46C9J442 243 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 F8VVB4 439 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 F8VWA3 439 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 J3QT63 122 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 SLC1A7O00341 560 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 ADAM20O43506 726 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 NOS1APO75052 506 aaPredicted RBP7.1□□□□□ -1.27
UBR1-204ENST00000563239 ACAA1P09110 424 aaPredicted RBP7.1□□□□□ -1.27
UBR1-204ENST00000563239 CCDC159P0C7I6 412 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 PGA5P0DJD9 388 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 MUC1P15941 1255 aaPredicted RBP7.1□□□□□ -1.27
UBR1-204ENST00000563239 ZNF12P17014 697 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 ATF1P18846 271 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 MYL12AP19105 171 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 HAAOP46952 286 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 PITPNBP48739 271 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 GMFBP60983 142 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 ERVK11-1P61568 191 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms