RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 DRAM1Q8N682 238 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 TTLQ8NG68 377 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 OR10G6Q8NH81 332 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 ERMNQ8TAM6 284 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 CIRBP-AS1Q8TBR5 109 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 C18orf15Q96N68 181 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 ALS2CR12Q96Q35 445 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 TEAD3Q99594 435 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 SLC17A9Q9BYT1 436 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 NDEL1Q9GZM8 345 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 COA1Q9GZY4 146 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 RPP21Q9H633 154 aaKnown RBP2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 PSTPIP2Q9H939 334 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 SIRT7Q9NRC8 400 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 HEBP1Q9NRV9 189 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 ZNF355PQ9NSJ1 428 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 DDX19AQ9NUU7 478 aaKnown RBP2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 ZNRD1Q9P1U0 126 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 CFL2Q9Y281 166 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 TNS2Q63HR2 1409 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 ADAMTS13Q76LX8 1427 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 CARMIL3Q8ND23 1372 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 EVC2Q86UK5 1308 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 A0A0U1RQV1 116 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 TNFRSF11BO00300 401 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 MYL12BO14950 172 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 RBFOX2O43251 390 aaKnown RBP eCLIP2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 SULT1B1O43704 296 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 NDUFS5O43920 106 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 CRTAPO75718 401 aaPredicted RBP2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 RCBTB2O95199 551 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 LDOC1O95751 146 aaPredicted RBP2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 CST4P01036 141 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 IGLV3-25P01717 112 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 MT-ND4P03905 459 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 OR5AL1P0C617 328 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 CXCR1P25024 350 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 OR2B6P58173 313 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 OR12D2P58182 307 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 TAS2R39P59534 338 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 ARPC4P59998 168 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 VSNL1P62760 191 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 LOXL1Q08397 574 aaPredicted RBP2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 PDPK2PQ6A1A2 396 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 NANOGP8Q6NSW7 305 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 SSX6Q7RTT6 188 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 WDR86Q86TI4 376 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 COMTD1Q86VU5 262 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 ZNF695Q8IW36 515 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 ITPRIPQ8IWB1 547 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 NELFCDQ8IXH7 590 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 CA13Q8N1Q1 262 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 RNF10Q8N5U6 811 aaKnown RBP2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 CCNYL1Q8N7R7 359 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 OR8G5Q8NG78 346 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 OR4M2Q8NGB6 313 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 OR4M1Q8NGD0 313 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 OR10Z1Q8NGY1 313 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 OR1S1Q8NH92 325 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 DOK4Q8TEW6 326 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 DDI1Q8WTU0 396 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 C22orf15Q8WYQ4 148 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 OR5P2Q8WZ92 322 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 ANKRD7Q92527 254 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 CPNE4Q96A23 557 aaPredicted RBP2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 CYTH2Q99418 400 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 SULT4A1Q9BR01 284 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 TIMM29Q9BSF4 260 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 MARVELD1Q9BSK0 173 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 UPF3BQ9BZI7 483 aaKnown RBP2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 ZNF430Q9H8G1 570 aaPredicted RBP2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 C8orf17Q9NRJ1 99 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 MS4A12Q9NXJ0 267 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 RAB26Q9ULW5 256 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 C15orf41Q9Y2V0 281 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 CBY1Q9Y3M2 126 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 LRRC42Q9Y546 428 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 GMEB1Q9Y692 573 aa2.02□□□□□ -2.09
SHCBP1-202ENST00000563219 MYO3BQ8WXR4 1341 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 IGSF9BQ9UPX0 1349 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 SLC5A10A0PJK1 596 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 SULT1C2O00338 296 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 EIF1BO60739 113 aaKnown RBP2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 CCDC22O60826 627 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 YIF1AO95070 293 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 VAMP5O95183 116 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 ZNF688P0C7X2 276 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 ME2P23368 584 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 TGFBR1P36897 503 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 EIF1P41567 113 aaKnown RBP2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 MAGEA3P43357 314 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 MAGEA6P43360 314 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 HAAOP46952 286 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 TUFMP49411 452 aaKnown RBP2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 PRLHRP49683 370 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 PSMD7P51665 324 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 MNAT1P51948 309 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 PLTPP55058 493 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 CMC4P56277 68 aaPredicted RBP2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 GRB2P62993 217 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms