RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 LRRC30A6NM36 301 aa13.14□□□□□ -0.31
USB1-208ENST00000563207 HAX1O00165 279 aa13.14□□□□□ -0.31
USB1-208ENST00000563207 GATBO75879 557 aaKnown RBP13.14□□□□□ -0.31
USB1-208ENST00000563207 LALBAP00709 142 aa13.14□□□□□ -0.31
USB1-208ENST00000563207 MT-ND2P03891 347 aa13.14□□□□□ -0.31
USB1-208ENST00000563207 ZFP36P26651 326 aaKnown RBP13.14□□□□□ -0.31
USB1-208ENST00000563207 LCN2P80188 198 aa13.14□□□□□ -0.31
USB1-208ENST00000563207 GPR50Q13585 617 aa13.14□□□□□ -0.31
USB1-208ENST00000563207 TBCEQ15813 527 aaPredicted RBP13.14□□□□□ -0.31
USB1-208ENST00000563207 FAM76BQ5HYJ3 339 aa13.14□□□□□ -0.31
USB1-208ENST00000563207 XAF1Q6GPH4 301 aa13.14□□□□□ -0.31
USB1-208ENST00000563207 SVOPQ8N4V2 548 aa13.14□□□□□ -0.31
USB1-208ENST00000563207 Q8TCH9 128 aa13.14□□□□□ -0.31
USB1-208ENST00000563207 GPR148Q8TDV2 347 aa13.14□□□□□ -0.31
USB1-208ENST00000563207 SGCDQ92629 289 aa13.14□□□□□ -0.31
USB1-208ENST00000563207 FN3KRPQ9HA64 309 aa13.14□□□□□ -0.31
USB1-208ENST00000563207 LRCH1Q9Y2L9 728 aa13.14□□□□□ -0.31
USB1-208ENST00000563207 LSM2Q9Y333 95 aaKnown RBP13.14□□□□□ -0.31
USB1-208ENST00000563207 ISPDA4D126 451 aa13.13□□□□□ -0.31
USB1-208ENST00000563207 ANKRD61A6NGH8 418 aa13.13□□□□□ -0.31
USB1-208ENST00000563207 SEC61A1P61619 476 aaKnown RBP13.13□□□□□ -0.31
USB1-208ENST00000563207 GNG3P63215 75 aa13.13□□□□□ -0.31
USB1-208ENST00000563207 MED22Q15528 200 aa13.13□□□□□ -0.31
USB1-208ENST00000563207 KCTD21Q4G0X4 260 aa13.13□□□□□ -0.31
USB1-208ENST00000563207 YIF1BQ5BJH7 314 aa13.13□□□□□ -0.31
USB1-208ENST00000563207 UTS2BQ765I0 119 aa13.13□□□□□ -0.31
USB1-208ENST00000563207 PEG10Q86TG7 708 aaKnown RBP13.13□□□□□ -0.31
USB1-208ENST00000563207 C1orf87Q8N0U7 546 aa13.13□□□□□ -0.31
USB1-208ENST00000563207 OR13C3Q8NGS6 347 aa13.13□□□□□ -0.31
USB1-208ENST00000563207 OR11L1Q8NGX0 322 aa13.13□□□□□ -0.31
USB1-208ENST00000563207 C22orf15Q8WYQ4 148 aa13.13□□□□□ -0.31
USB1-208ENST00000563207 THRSPQ92748 146 aa13.13□□□□□ -0.31
USB1-208ENST00000563207 TIMD4Q96H15 378 aa13.13□□□□□ -0.31
USB1-208ENST00000563207 CHST5Q9GZS9 411 aa13.13□□□□□ -0.31
USB1-208ENST00000563207 NEK6Q9HC98 313 aa13.13□□□□□ -0.31
USB1-208ENST00000563207 OPN4Q9UHM6 478 aa13.13□□□□□ -0.31
USB1-208ENST00000563207 FSTL3O95633 263 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 CD2P06729 351 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 IRF2P14316 349 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 ZNF20P17024 532 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 CELP19835 753 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 PCMT1P22061 227 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 PLCXD3Q63HM9 321 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 MOB3CQ70IA8 216 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 SERPINA12Q8IW75 414 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 MS4A15Q8N5U1 240 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 PARP16Q8N5Y8 322 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 OR5D14Q8NGL3 314 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 GHSRQ92847 366 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 RAB1CQ92928 201 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 FGGYQ96C11 551 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 RNF170Q96K19 258 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 GAL3ST1Q99999 423 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 TLNRD1Q9H1K6 362 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 MMP26Q9NRE1 261 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 TMEM106BQ9NUM4 274 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 SLC7A11Q9UPY5 501 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 DHDHQ9UQ10 334 aa13.12□□□□□ -0.31
USB1-208ENST00000563207 SIRT4Q9Y6E7 314 aaPredicted RBP13.12□□□□□ -0.31
USB1-208ENST00000563207 IGHV3-64DA0A0J9YX35 117 aa13.11□□□□□ -0.31
USB1-208ENST00000563207 ALX3O95076 343 aa13.11□□□□□ -0.31
USB1-208ENST00000563207 TNFAIP8O95379 198 aa13.11□□□□□ -0.31
USB1-208ENST00000563207 EPHA1P21709 976 aa13.11□□□□□ -0.31
USB1-208ENST00000563207 CFHR2P36980 270 aa13.11□□□□□ -0.31
USB1-208ENST00000563207 MLLT11Q13015 90 aaPredicted RBP13.11□□□□□ -0.31
USB1-208ENST00000563207 CNN3Q15417 329 aaKnown RBP13.11□□□□□ -0.31
USB1-208ENST00000563207 CEP78Q5JTW2 689 aa13.11□□□□□ -0.31
USB1-208ENST00000563207 ZNF367Q7RTV3 350 aa13.11□□□□□ -0.31
USB1-208ENST00000563207 MOGAT3Q86VF5 341 aa13.11□□□□□ -0.31
USB1-208ENST00000563207 OR1M1Q8NGA1 313 aa13.11□□□□□ -0.31
USB1-208ENST00000563207 OR51A4Q8NGJ6 313 aa13.11□□□□□ -0.31
USB1-208ENST00000563207 TSEN15Q8WW01 171 aaKnown RBP13.11□□□□□ -0.31
USB1-208ENST00000563207 HPSE2Q8WWQ2 592 aa13.11□□□□□ -0.31
USB1-208ENST00000563207 FCGR1BQ92637 280 aa13.11□□□□□ -0.31
USB1-208ENST00000563207 UFD1Q92890 307 aa13.11□□□□□ -0.31
USB1-208ENST00000563207 DVL3Q92997 716 aaPredicted RBP13.11□□□□□ -0.31
USB1-208ENST00000563207 RAB39BQ96DA2 213 aa13.11□□□□□ -0.31
USB1-208ENST00000563207 PGLYRP3Q96LB9 341 aa13.11□□□□□ -0.31
USB1-208ENST00000563207 OR5M11Q96RB7 305 aa13.11□□□□□ -0.31
USB1-208ENST00000563207 SLC6A7Q99884 636 aa13.11□□□□□ -0.31
USB1-208ENST00000563207 ACOT13Q9NPJ3 140 aa13.11□□□□□ -0.31
USB1-208ENST00000563207 WNK2Q9Y3S1 2297 aa13.11□□□□□ -0.31
USB1-208ENST00000563207 ZNF732B4DXR9 585 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 TMEM178BH3BS89 294 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 H3BSH0 61 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 IGHV2-70P01814 119 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 GRPP07492 148 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 OCM2P0CE71 109 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 FUT6P51993 359 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 EMX1Q04741 257 aaPredicted RBP13.1□□□□□ -0.31
USB1-208ENST00000563207 ZNF154Q13106 437 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 TPBGQ13641 420 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 TRAM1Q15629 374 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 Q499Y3 187 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 DCAF12L2Q5VW00 463 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 ZNF773Q6PK81 442 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 KCTD8Q6ZWB6 473 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 ZNF573Q86YE8 665 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 SPARTQ8N0X7 666 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 DNAAF1Q8NEP3 725 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms