RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 PCDHB16Q9NRJ7 776 aa18.55■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 KCNN3Q9UGI6 736 aa18.55■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 BDP1A6H8Y1 2624 aa18.54■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 C9orf170A2RU37 121 aa18.54■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 LRP3O75074 770 aa18.54■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 HTR3BO95264 441 aa18.54■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 HLA-GP17693 338 aa18.54■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 IL13RA1P78552 427 aa18.54■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 PPP1R1AQ13522 171 aa18.54■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 ZNF766Q5HY98 468 aa18.54■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 COLCA1Q6ZS62 124 aa18.54■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 OR8H3Q8N146 312 aa18.54■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 CPEB3Q8NE35 698 aaKnown RBP18.54■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 DEFB124Q8NES8 71 aa18.54■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 MAB21L2Q9Y586 359 aa18.54■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 FXYD6-FXYD2A0A087WZ82 144 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 RFPL4AA6NLU0 287 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 CEACAM18A8MTB9 384 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 CDRT15L2A8MXV6 281 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 RFPL4AL1F8VTS6 287 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 FTH1P19P0C7X4 201 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 ARR3P36575 388 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 SNU13P55769 128 aaKnown RBP18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 LY6G6FQ5SQ64 297 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 CSNK2A3Q8NEV1 391 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 ST6GALNAC5Q9BVH7 336 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 FXYD6Q9H0Q3 95 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 LDAHQ9H6V9 325 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 PLEKHJ1Q9NW61 149 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 EFSO43281 561 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 CD8AP01732 235 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 SERPINA5P05154 406 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 AGTR1P30556 359 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 S100A11P31949 105 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 EXOSC2Q13868 293 aaKnown RBP18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 ATP1A1-AS1Q5TC04 95 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 DPPA2Q7Z7J5 298 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 PXT1Q8NFP0 134 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 MARCH1Q8TCQ1 289 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 MRPS24Q96EL2 167 aaKnown RBP18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 IL36GQ9NZH8 169 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 HSF4Q9ULV5 492 aa18.53■□□□□ 0.56
VPS9D1-AS1-202ENST00000562866 ARPC5O15511 151 aa18.52■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 DUS4LO95620 317 aaKnown RBP18.52■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 EDN3P14138 238 aa18.52■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 GABRR1P24046 479 aa18.52■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 FPR2P25090 351 aa18.52■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 PLCXD3Q63HM9 321 aa18.52■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 MOB3CQ70IA8 216 aa18.52■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 PARD6AQ9NPB6 346 aa18.52■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 NCOR1O75376 2440 aa18.51■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 IGKV1-27A0A075B6S5 117 aa18.51■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 A0A096LPE4 126 aa18.51■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 TRGV5A0A0B4J1U4 118 aa18.51■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 A0A1W2PPZ6 126 aa18.51■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 LINC00862A6NCI5 91 aa18.51■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 LIPCP11150 499 aa18.51■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 AKR1C4P17516 323 aa18.51■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 RAB14P61106 215 aa18.51■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 SORDQ00796 357 aa18.51■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 CHRFAM7AQ494W8 412 aa18.51■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 TMUB2Q71RG4 321 aa18.51■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 ADAD2Q8NCV1 583 aaKnown RBP18.51■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 TMEM185AQ8NFB2 350 aa18.51■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 PDCD10Q9BUL8 212 aa18.51■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 PPA2Q9H2U2 334 aa18.51■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 GP6Q9HCN6 339 aa18.51■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 COMMD9Q9P000 198 aa18.51■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 TUBAL3A6NHL2 446 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 SPRY1O43609 319 aaPredicted RBP18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 RPA2P15927 270 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 PPP3CBP16298 524 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 VAMP1P23763 118 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 MALLQ13021 153 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 TGIF1Q15583 401 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 TMEM128Q5BJH2 165 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 CLLU1Q5K131 121 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 C9orf135Q5VTT2 229 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 NSUN5P2Q63ZY6 315 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 OR5AP2Q8NGF4 316 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 PIGCQ92535 297 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 DEFB127Q9H1M4 99 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 FN3KRPQ9HA64 309 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 EDARQ9UNE0 448 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 GPR132Q9UNW8 380 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 ANGPTL7O43827 346 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 RP2O75695 350 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 ECI1P42126 302 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 NKAPLQ5M9Q1 402 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 C3P1Q6ZMU1 363 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 EMG1Q92979 244 aaKnown RBP18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 APOBEC3DQ96AK3 386 aaPredicted RBP18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 POM121Q96HA1 1249 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 WDYHV1Q96HA8 205 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 IRF2BPLQ9H1B7 796 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 LIPGQ9Y5X9 500 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 DMDP11532 3685 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 WDFY3Q8IZQ1 3526 aa18.5■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 FIGNL2A6NMB9 653 aa18.49■□□□□ 0.55
VPS9D1-AS1-202ENST00000562866 HLA-HP01893 362 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms