RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 WNT2P09544 360 aa13.98□□□□□ -0.17
CLK3-207ENST00000562389 RPS2P15880 293 aaKnown RBP13.98□□□□□ -0.17
CLK3-207ENST00000562389 ZNF20P17024 532 aa13.98□□□□□ -0.17
CLK3-207ENST00000562389 SLC35A2P78381 396 aa13.98□□□□□ -0.17
CLK3-207ENST00000562389 CNN3Q15417 329 aaKnown RBP13.98□□□□□ -0.17
CLK3-207ENST00000562389 UBE2V2Q15819 145 aa13.98□□□□□ -0.17
CLK3-207ENST00000562389 SFRP4Q6FHJ7 346 aaPredicted RBP13.98□□□□□ -0.17
CLK3-207ENST00000562389 UTS2BQ765I0 119 aa13.98□□□□□ -0.17
CLK3-207ENST00000562389 ZNF573Q86YE8 665 aa13.98□□□□□ -0.17
CLK3-207ENST00000562389 DEFB108BQ8NET1 73 aa13.98□□□□□ -0.17
CLK3-207ENST00000562389 AQP3Q92482 292 aa13.98□□□□□ -0.17
CLK3-207ENST00000562389 MYDGFQ969H8 173 aa13.98□□□□□ -0.17
CLK3-207ENST00000562389 TMEM186Q96B77 213 aa13.98□□□□□ -0.17
CLK3-207ENST00000562389 SMIM19Q96E16 107 aa13.98□□□□□ -0.17
CLK3-207ENST00000562389 CNBD2Q96M20 576 aa13.98□□□□□ -0.17
CLK3-207ENST00000562389 ZNF184Q99676 751 aaPredicted RBP13.98□□□□□ -0.17
CLK3-207ENST00000562389 LPAR2Q9HBW0 351 aa13.98□□□□□ -0.17
CLK3-207ENST00000562389 SLC7A11Q9UPY5 501 aa13.98□□□□□ -0.17
CLK3-207ENST00000562389 LRCH1Q9Y2L9 728 aa13.98□□□□□ -0.17
CLK3-207ENST00000562389 TPRKBQ9Y3C4 175 aa13.98□□□□□ -0.17
CLK3-207ENST00000562389 MTORP42345 2549 aa13.98□□□□□ -0.17
CLK3-207ENST00000562389 PTGES3LE9PB15 166 aa13.97□□□□□ -0.17
CLK3-207ENST00000562389 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.97□□□□□ -0.17
CLK3-207ENST00000562389 TNFRSF13BO14836 293 aaPredicted RBP13.97□□□□□ -0.17
CLK3-207ENST00000562389 NDUFA2O43678 99 aa13.97□□□□□ -0.17
CLK3-207ENST00000562389 PLPP2O43688 288 aa13.97□□□□□ -0.17
CLK3-207ENST00000562389 FOXH1O75593 365 aa13.97□□□□□ -0.17
CLK3-207ENST00000562389 MUC1P15941 1255 aaPredicted RBP13.97□□□□□ -0.17
CLK3-207ENST00000562389 HAAOP46952 286 aa13.97□□□□□ -0.17
CLK3-207ENST00000562389 WNT4P56705 351 aa13.97□□□□□ -0.17
CLK3-207ENST00000562389 TAS2R43P59537 309 aa13.97□□□□□ -0.17
CLK3-207ENST00000562389 SEC61A1P61619 476 aaKnown RBP13.97□□□□□ -0.17
CLK3-207ENST00000562389 HAGHLQ6PII5 290 aaPredicted RBP13.97□□□□□ -0.17
CLK3-207ENST00000562389 NLRC3Q7RTR2 1065 aa13.97□□□□□ -0.17
CLK3-207ENST00000562389 FAM90A1Q86YD7 464 aa13.97□□□□□ -0.17
CLK3-207ENST00000562389 NANOGP1Q8N7R0 232 aa13.97□□□□□ -0.17
CLK3-207ENST00000562389 OR8B3Q8NGG8 313 aa13.97□□□□□ -0.17
CLK3-207ENST00000562389 ZNF671Q8TAW3 534 aa13.97□□□□□ -0.17
CLK3-207ENST00000562389 FGGYQ96C11 551 aa13.97□□□□□ -0.17
CLK3-207ENST00000562389 C12orf43Q96C57 262 aaKnown RBP13.97□□□□□ -0.17
CLK3-207ENST00000562389 NEIL1Q96FI4 390 aaPredicted RBP13.97□□□□□ -0.17
CLK3-207ENST00000562389 OR8B2Q96RD0 313 aa13.97□□□□□ -0.17
CLK3-207ENST00000562389 CDCA4Q9BXL8 241 aa13.97□□□□□ -0.17
CLK3-207ENST00000562389 PAK1IP1Q9NWT1 392 aaPredicted RBP13.97□□□□□ -0.17
CLK3-207ENST00000562389 HIF1ANQ9NWT6 349 aa13.97□□□□□ -0.17
CLK3-207ENST00000562389 ERGIC3Q9Y282 383 aa13.97□□□□□ -0.17
CLK3-207ENST00000562389 POLR3KQ9Y2Y1 108 aaPredicted RBP13.97□□□□□ -0.17
CLK3-207ENST00000562389 SIRT4Q9Y6E7 314 aaPredicted RBP13.97□□□□□ -0.17
CLK3-207ENST00000562389 FN1P02751 2386 aaKnown RBP13.97□□□□□ -0.17
CLK3-207ENST00000562389 DOCK11Q5JSL3 2073 aa13.96□□□□□ -0.17
CLK3-207ENST00000562389 J3QT63 122 aa13.96□□□□□ -0.17
CLK3-207ENST00000562389 RHBDL1O75783 438 aa13.96□□□□□ -0.17
CLK3-207ENST00000562389 PCMT1P22061 227 aa13.96□□□□□ -0.17
CLK3-207ENST00000562389 MPZP25189 248 aa13.96□□□□□ -0.17
CLK3-207ENST00000562389 FUT6P51993 359 aa13.96□□□□□ -0.17
CLK3-207ENST00000562389 MICBQ29980 383 aa13.96□□□□□ -0.17
CLK3-207ENST00000562389 ESCO2Q56NI9 601 aa13.96□□□□□ -0.17
CLK3-207ENST00000562389 DMKNQ6E0U4 476 aaPredicted RBP13.96□□□□□ -0.17
CLK3-207ENST00000562389 DNAAF1Q8NEP3 725 aa13.96□□□□□ -0.17
CLK3-207ENST00000562389 TRMT10AQ8TBZ6 339 aaKnown RBP13.96□□□□□ -0.17
CLK3-207ENST00000562389 RGP1Q92546 391 aaPredicted RBP13.96□□□□□ -0.17
CLK3-207ENST00000562389 PKIBQ9C010 78 aa13.96□□□□□ -0.17
CLK3-207ENST00000562389 Q9H521 79 aa13.96□□□□□ -0.17
CLK3-207ENST00000562389 DUSP21Q9H596 190 aa13.96□□□□□ -0.17
CLK3-207ENST00000562389 DHDHQ9UQ10 334 aa13.96□□□□□ -0.17
CLK3-207ENST00000562389 PCDHGB5Q9Y5G0 923 aa13.96□□□□□ -0.17
CLK3-207ENST00000562389 NSD1Q96L73 2696 aaPredicted RBP13.95□□□□□ -0.18
CLK3-207ENST00000562389 IGHV3OR15-7A0A075B7D8 119 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 PPIAL4CA0A0B4J2A2 164 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 IGKV1-9A0A0C4DH69 117 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 FAM230AA0A1W2PPH8 454 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 KIAA1324LA8MWY0 1029 aaPredicted RBP13.95□□□□□ -0.18
CLK3-207ENST00000562389 AKR7A2O43488 359 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 GYPAP02724 150 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 ATF1P18846 271 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 CRHBPP24387 322 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 ZFP36P26651 326 aaKnown RBP13.95□□□□□ -0.18
CLK3-207ENST00000562389 LCN2P80188 198 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 RBM48Q5RL73 367 aaKnown RBP13.95□□□□□ -0.18
CLK3-207ENST00000562389 LYPD2Q6UXB3 125 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 PARP16Q8N5Y8 322 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 POC1AQ8NBT0 407 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 GPR148Q8TDV2 347 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 NPRL2Q8WTW4 380 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 TSEN15Q8WW01 171 aaKnown RBP13.95□□□□□ -0.18
CLK3-207ENST00000562389 SGCDQ92629 289 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 SPSB1Q96BD6 273 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 BORCS8Q96FH0 119 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 MND1Q9BWT6 205 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 SSBP3Q9BWW4 388 aaPredicted RBP13.95□□□□□ -0.18
CLK3-207ENST00000562389 KAAG1Q9UBP8 84 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 CTSZQ9UBR2 303 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 LPAR3Q9UBY5 353 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 POLDIP2Q9Y2S7 368 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 ZNF281Q9Y2X9 895 aa13.95□□□□□ -0.18
CLK3-207ENST00000562389 IGKV1-27A0A075B6S5 117 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 DENRO43583 198 aaKnown RBP13.94□□□□□ -0.18
CLK3-207ENST00000562389 SYNGR1O43759 233 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 NOS1APO75052 506 aaPredicted RBP13.94□□□□□ -0.18
CLK3-207ENST00000562389 CRLF1O75462 422 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms