RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 DEFA3P59666 94 aa12.23□□□□□ -0.45
CNN2-204ENST00000562075 SCN1BQ07699 218 aa12.23□□□□□ -0.45
CNN2-204ENST00000562075 PDZK1IP1Q13113 114 aa12.23□□□□□ -0.45
CNN2-204ENST00000562075 RSU1Q15404 277 aa12.23□□□□□ -0.45
CNN2-204ENST00000562075 FAM189A2Q15884 450 aa12.23□□□□□ -0.45
CNN2-204ENST00000562075 IGFBP7Q16270 282 aa12.23□□□□□ -0.45
CNN2-204ENST00000562075 ALKBH6Q3KRA9 238 aa12.23□□□□□ -0.45
CNN2-204ENST00000562075 RNASE12Q5GAN4 147 aaKnown RBP12.23□□□□□ -0.45
CNN2-204ENST00000562075 ACBD4Q8NC06 268 aa12.23□□□□□ -0.45
CNN2-204ENST00000562075 TMEM104Q8NE00 496 aa12.23□□□□□ -0.45
CNN2-204ENST00000562075 OR10K1Q8NGX5 313 aa12.23□□□□□ -0.45
CNN2-204ENST00000562075 OR8S1Q8NH09 359 aa12.23□□□□□ -0.45
CNN2-204ENST00000562075 ITPKCQ96DU7 683 aa12.23□□□□□ -0.45
CNN2-204ENST00000562075 MICU1Q9BPX6 476 aa12.23□□□□□ -0.45
CNN2-204ENST00000562075 ADAT1Q9BUB4 502 aaKnown RBP12.23□□□□□ -0.45
CNN2-204ENST00000562075 RTL8AQ9BWD3 113 aa12.23□□□□□ -0.45
CNN2-204ENST00000562075 FGF23Q9GZV9 251 aaPredicted RBP12.23□□□□□ -0.45
CNN2-204ENST00000562075 BANF2Q9H503 90 aa12.23□□□□□ -0.45
CNN2-204ENST00000562075 SCGNO76038 276 aa12.22□□□□□ -0.45
CNN2-204ENST00000562075 SERPINA2P20848 420 aa12.22□□□□□ -0.45
CNN2-204ENST00000562075 GLRXP35754 106 aa12.22□□□□□ -0.45
CNN2-204ENST00000562075 GNG3P63215 75 aa12.22□□□□□ -0.45
CNN2-204ENST00000562075 NKX6-1P78426 367 aaPredicted RBP12.22□□□□□ -0.45
CNN2-204ENST00000562075 MRPS10P82664 201 aaKnown RBP12.22□□□□□ -0.45
CNN2-204ENST00000562075 GPR176Q14439 515 aa12.22□□□□□ -0.45
CNN2-204ENST00000562075 OR8G1Q15617 311 aa12.22□□□□□ -0.45
CNN2-204ENST00000562075 TMEM255AQ5JRV8 349 aa12.22□□□□□ -0.45
CNN2-204ENST00000562075 RAB12Q6IQ22 244 aa12.22□□□□□ -0.45
CNN2-204ENST00000562075 VHLLQ6RSH7 139 aa12.22□□□□□ -0.45
CNN2-204ENST00000562075 PIAS4Q8N2W9 510 aaPredicted RBP12.22□□□□□ -0.45
CNN2-204ENST00000562075 POC5Q8NA72 575 aa12.22□□□□□ -0.45
CNN2-204ENST00000562075 C19orf18Q8NEA5 215 aa12.22□□□□□ -0.45
CNN2-204ENST00000562075 PXT1Q8NFP0 134 aa12.22□□□□□ -0.45
CNN2-204ENST00000562075 OR8G5Q8NG78 346 aa12.22□□□□□ -0.45
CNN2-204ENST00000562075 URM1Q9BTM9 101 aaKnown RBP12.22□□□□□ -0.45
CNN2-204ENST00000562075 TMEM100Q9NV29 134 aa12.22□□□□□ -0.45
CNN2-204ENST00000562075 NDRG3Q9UGV2 375 aa12.22□□□□□ -0.45
CNN2-204ENST00000562075 COL6A6A6NMZ7 2263 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 PRR14LQ5THK1 2151 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.21□□□□□ -0.45
CNN2-204ENST00000562075 A0A1W2PP11 408 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 DPRXA6NFQ7 191 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 ABCD4O14678 606 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 GSTZ1O43708 216 aaPredicted RBP12.21□□□□□ -0.45
CNN2-204ENST00000562075 ZNF780AO75290 641 aaPredicted RBP12.21□□□□□ -0.45
CNN2-204ENST00000562075 HTR3BO95264 441 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 CYB5AP00167 134 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 HLA-DQB1P01920 261 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 CSTBP04080 98 aaKnown RBP12.21□□□□□ -0.45
CNN2-204ENST00000562075 MGMTP16455 207 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 HAAOP46952 286 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 VEGFCP49767 419 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 KLF3P57682 345 aaPredicted RBP12.21□□□□□ -0.45
CNN2-204ENST00000562075 RPS27AP62979 156 aaKnown RBP12.21□□□□□ -0.45
CNN2-204ENST00000562075 DGCR2P98153 550 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 SORDQ00796 357 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 BSPH1Q075Z2 132 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 SLC22A25Q6T423 547 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 ASCL4Q6XD76 172 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 SLC25A26Q70HW3 274 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 CDH24Q86UP0 819 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 ZNF573Q86YE8 665 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 CALHM1Q8IU99 346 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 ZNF611Q8N823 705 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 ZSCAN4Q8NAM6 433 aaPredicted RBP12.21□□□□□ -0.45
CNN2-204ENST00000562075 NUP37Q8NFH4 326 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 SMIM4Q8WVI0 70 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 THAP7Q9BT49 309 aaPredicted RBP12.21□□□□□ -0.45
CNN2-204ENST00000562075 SLC22A4Q9H015 551 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 LPAR5Q9H1C0 372 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 PCDHB16Q9NRJ7 776 aa12.21□□□□□ -0.45
CNN2-204ENST00000562075 USP24Q9UPU5 2620 aa12.21□□□□□ -0.46
CNN2-204ENST00000562075 LINC00854A0A1B0GVQ3 168 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 GABARAPH6UMI1 98 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 CHRM2P08172 466 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 ZNF250P15622 560 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 GRNP28799 593 aaKnown RBP12.2□□□□□ -0.46
CNN2-204ENST00000562075 SNTB1Q13884 538 aaKnown RBP12.2□□□□□ -0.46
CNN2-204ENST00000562075 CDSNQ15517 529 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 MSMPQ1L6U9 139 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 MOGAT2Q3SYC2 334 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 ZNF57Q68EA5 555 aaPredicted RBP12.2□□□□□ -0.46
CNN2-204ENST00000562075 MKXQ8IYA7 352 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 SAXO1Q8IYX7 474 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 CHST4Q8NCG5 386 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 OR56B1Q8NGI3 324 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 OR51T1Q8NGJ9 327 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 OR51F2Q8NH61 342 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 SETD6Q8TBK2 473 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 TMEM171Q8WVE6 324 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 FCAMRQ8WWV6 532 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 GCDHQ92947 438 aaPredicted RBP12.2□□□□□ -0.46
CNN2-204ENST00000562075 TRIM63Q969Q1 353 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 SYT3Q9BQG1 590 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 NICN1Q9BSH3 213 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 SELENOIQ9C0D9 397 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 ESRP2Q9H6T0 727 aaKnown RBP12.2□□□□□ -0.46
CNN2-204ENST00000562075 AUNIPQ9H7T9 357 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 NKIRAS2Q9NYR9 191 aa12.2□□□□□ -0.46
CNN2-204ENST00000562075 IL36GQ9NZH8 169 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms