RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 CSGALNACT2Q8N6G5 542 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 OR2L8Q8NGY9 312 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 NARS2Q96I59 477 aaKnown RBP3.71□□□□□ -1.82
SMG1-204ENST00000561940 BTN2A3PQ96KV6 586 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 DYRK4Q9NR20 520 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 OPN4Q9UHM6 478 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 SCN1AP35498 2009 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 LAMA3Q16787 3333 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 EDC4Q6P2E9 1401 aaKnown RBP3.7□□□□□ -1.82
SMG1-204ENST00000561940 NRXN2Q9P2S2 1712 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 SLC22A20A6NK97 555 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 H0YJW9 148 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 BPY2O14599 106 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 SLC22A5O76082 557 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 GLAP06280 429 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 RAB5AP20339 215 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 LOXP28300 417 aaPredicted RBP3.7□□□□□ -1.82
SMG1-204ENST00000561940 MYCNOSP40205 109 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 EIF4EBP1Q13541 118 aaPredicted RBP3.7□□□□□ -1.82
SMG1-204ENST00000561940 ABCA11PQ4W5N1 156 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 H3F3CQ6NXT2 135 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 ULK3Q6PHR2 472 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 VTCN1Q7Z7D3 282 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 CIRBP-AS1Q8TBR5 109 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 TOP1MTQ969P6 601 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 HAUS1Q96CS2 278 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 TMEM243Q9BU79 118 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 ZNF442Q9H7R0 627 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 FANCEQ9HB96 536 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 NECAP2Q9NVZ3 263 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 CHTOPQ9Y3Y2 248 aaKnown RBP3.7□□□□□ -1.82
SMG1-204ENST00000561940 PAPPA2Q9BXP8 1791 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 CACNA1BQ00975 2339 aa3.7□□□□□ -1.82
SMG1-204ENST00000561940 DLEC1Q9Y238 1755 aa3.69□□□□□ -1.82
SMG1-204ENST00000561940 FAM208AQ9UK61 1670 aaKnown RBP3.69□□□□□ -1.82
SMG1-204ENST00000561940 IGKV1-27A0A075B6S5 117 aa3.69□□□□□ -1.82
SMG1-204ENST00000561940 TRDMT1O14717 391 aaKnown RBP3.69□□□□□ -1.82
SMG1-204ENST00000561940 CCNKO75909 580 aa3.69□□□□□ -1.82
SMG1-204ENST00000561940 VAMP5O95183 116 aa3.69□□□□□ -1.82
SMG1-204ENST00000561940 LINC00869P0C866 280 aa3.69□□□□□ -1.82
SMG1-204ENST00000561940 POLR2IP36954 125 aaKnown RBP3.69□□□□□ -1.82
SMG1-204ENST00000561940 CRADDP78560 199 aa3.69□□□□□ -1.82
SMG1-204ENST00000561940 TFDP2Q14188 446 aa3.69□□□□□ -1.82
SMG1-204ENST00000561940 CAVIN4Q5BKX8 364 aa3.69□□□□□ -1.82
SMG1-204ENST00000561940 MLIPQ5VWP3 458 aa3.69□□□□□ -1.82
SMG1-204ENST00000561940 ZNF645Q8N7E2 425 aa3.69□□□□□ -1.82
SMG1-204ENST00000561940 TCP10LQ8TDR4 215 aa3.69□□□□□ -1.82
SMG1-204ENST00000561940 ESR2Q92731 530 aa3.69□□□□□ -1.82
SMG1-204ENST00000561940 RBBP8Q99708 897 aa3.69□□□□□ -1.82
SMG1-204ENST00000561940 AGMATQ9BSE5 352 aa3.69□□□□□ -1.82
SMG1-204ENST00000561940 GGTLC1Q9BX51 225 aa3.69□□□□□ -1.82
SMG1-204ENST00000561940 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
SMG1-204ENST00000561940 SLX4Q8IY92 1834 aa3.69□□□□□ -1.82
SMG1-204ENST00000561940 BRCA2P51587 3418 aa3.68□□□□□ -1.82
SMG1-204ENST00000561940 FLT4P35916 1363 aa3.68□□□□□ -1.82
SMG1-204ENST00000561940 SERPINB7O75635 380 aa3.68□□□□□ -1.82
SMG1-204ENST00000561940 KLK1P06870 262 aa3.68□□□□□ -1.82
SMG1-204ENST00000561940 CISD3P0C7P0 127 aa3.68□□□□□ -1.82
SMG1-204ENST00000561940 PRKACAP17612 351 aa3.68□□□□□ -1.82
SMG1-204ENST00000561940 MSR1P21757 451 aa3.68□□□□□ -1.82
SMG1-204ENST00000561940 CCNG1P51959 295 aa3.68□□□□□ -1.82
SMG1-204ENST00000561940 TAS2R31P59538 309 aa3.68□□□□□ -1.82
SMG1-204ENST00000561940 C5orf64Q2M2E5 130 aa3.68□□□□□ -1.82
SMG1-204ENST00000561940 RWDD4Q6NW29 188 aaKnown RBP3.68□□□□□ -1.82
SMG1-204ENST00000561940 RAB43Q86YS6 212 aa3.68□□□□□ -1.82
SMG1-204ENST00000561940 OR5T3Q8NGG3 340 aa3.68□□□□□ -1.82
SMG1-204ENST00000561940 BAALCQ8WXS3 180 aa3.68□□□□□ -1.82
SMG1-204ENST00000561940 GPR21Q99679 349 aa3.68□□□□□ -1.82
SMG1-204ENST00000561940 FBXO8Q9NRD0 319 aa3.68□□□□□ -1.82
SMG1-204ENST00000561940 KPTNQ9Y664 436 aa3.68□□□□□ -1.82
SMG1-204ENST00000561940 KIF26AQ9ULI4 1882 aaPredicted RBP3.68□□□□□ -1.82
SMG1-204ENST00000561940 MUC3AQ02505 3323 aa3.67□□□□□ -1.82
SMG1-204ENST00000561940 ZDBF2Q9HCK1 2354 aa3.67□□□□□ -1.82
SMG1-204ENST00000561940 SPTBN5Q9NRC6 3674 aaKnown RBP3.67□□□□□ -1.82
SMG1-204ENST00000561940 H3BN98 237 aa3.67□□□□□ -1.82
SMG1-204ENST00000561940 TGM6O95932 706 aa3.67□□□□□ -1.82
SMG1-204ENST00000561940 MBP02144 154 aa3.67□□□□□ -1.82
SMG1-204ENST00000561940 CPN2P22792 545 aa3.67□□□□□ -1.82
SMG1-204ENST00000561940 TALDO1P37837 337 aa3.67□□□□□ -1.82
SMG1-204ENST00000561940 OPRK1P41145 380 aa3.67□□□□□ -1.82
SMG1-204ENST00000561940 UBE2E1P51965 193 aa3.67□□□□□ -1.82
SMG1-204ENST00000561940 MOBPQ13875 183 aa3.67□□□□□ -1.82
SMG1-204ENST00000561940 UBALD2Q8IYN6 164 aa3.67□□□□□ -1.82
SMG1-204ENST00000561940 GHSRQ92847 366 aa3.67□□□□□ -1.82
SMG1-204ENST00000561940 L3HYPDHQ96EM0 354 aa3.67□□□□□ -1.82
SMG1-204ENST00000561940 UBE2E2Q96LR5 201 aa3.67□□□□□ -1.82
SMG1-204ENST00000561940 C8orf17Q9NRJ1 99 aa3.67□□□□□ -1.82
SMG1-204ENST00000561940 ZNF282Q9UDV7 671 aaPredicted RBP3.67□□□□□ -1.82
SMG1-204ENST00000561940 RFNGQ9Y644 331 aa3.67□□□□□ -1.82
SMG1-204ENST00000561940 PTPRZ1P23471 2315 aaPredicted RBP3.67□□□□□ -1.82
SMG1-204ENST00000561940 HTTP42858 3142 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 COL4A5P29400 1685 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 TRAV6A0A075B6T7 132 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 A0A1W2PPV4 95 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 ZNF701M0R085 212 aaPredicted RBP3.66□□□□□ -1.82
SMG1-204ENST00000561940 CHMP2AO43633 222 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 GLSO94925 669 aaPredicted RBP3.66□□□□□ -1.82
SMG1-204ENST00000561940 HLA-DQA1P01909 254 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 CRYGCP07315 174 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 MUC1P15941 1255 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms