RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 DHRS3O75911 302 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 ATP5HO75947 161 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 TTRP02766 147 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 ACAA1P09110 424 aaPredicted RBP8.46□□□□□ -1.06
CLK3-205ENST00000561673 FAHP16930 419 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 GLRA1P23415 457 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 POLR2IP36954 125 aaKnown RBP8.46□□□□□ -1.06
CLK3-205ENST00000561673 DLX1P56177 255 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 PRB3Q04118 309 aaPredicted RBP8.46□□□□□ -1.06
CLK3-205ENST00000561673 C1orf146Q5VVC0 180 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 ZNF322Q6U7Q0 402 aaPredicted RBP8.46□□□□□ -1.06
CLK3-205ENST00000561673 PLEKHG7Q6ZR37 379 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 THAP5Q7Z6K1 395 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 Q8N7P7 452 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 C8orf46Q8TAG6 207 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 SSMEM1Q8WWF3 244 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 AQP3Q92482 292 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 H1FXQ92522 213 aaKnown RBP8.46□□□□□ -1.06
CLK3-205ENST00000561673 DUS3LQ96G46 650 aaKnown RBP8.46□□□□□ -1.06
CLK3-205ENST00000561673 DMRTB1Q96MA1 342 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 GABARAPL1Q9H0R8 117 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 CLN6Q9NWW5 311 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 NLKQ9UBE8 527 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 SLC25A10Q9UBX3 287 aaPredicted RBP8.46□□□□□ -1.06
CLK3-205ENST00000561673 MRM2Q9UI43 246 aaKnown RBP8.46□□□□□ -1.06
CLK3-205ENST00000561673 ENPP5Q9UJA9 477 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 OR52A1Q9UKL2 312 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 R4GMQ9 66 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 IGKV1D-17A0A075B6S4 117 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 NKX6-3A6NJ46 265 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 ZNF670-ZNF695F2Z2N8 137 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 NRASP01111 189 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 IGHV4-59P01825 116 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 CRYBA1P05813 215 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 PSG2P11465 335 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 NDUFB7P17568 137 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 IER3P46695 156 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 GABRA2P47869 451 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 CAV3P56539 151 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 ACTR3P61158 418 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 RELBQ01201 579 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 EGR3Q06889 387 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 PRR31Q5SQ13 230 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 ZBTB37Q5TC79 503 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 PLCXD3Q63HM9 321 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 HAGHLQ6PII5 290 aaPredicted RBP8.45□□□□□ -1.06
CLK3-205ENST00000561673 METAP1DQ6UB28 335 aaPredicted RBP8.45□□□□□ -1.06
CLK3-205ENST00000561673 GID4Q8IVV7 300 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 ELMOD2Q8IZ81 293 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 CMTM4Q8IZR5 234 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 KIR3DL3Q8N743 410 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 ZNRF1Q8ND25 227 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 OR51G2Q8NGK0 314 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 ZNF671Q8TAW3 534 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 TBC1D15Q8TC07 691 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 MNTQ99583 582 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 CIB1Q99828 191 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 SEMA6AQ9H2E6 1030 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 ZNF696Q9H7X3 374 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 SIRT7Q9NRC8 400 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 C1RLQ9NZP8 487 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 ZNF222Q9UK12 451 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 GTF2A1LQ9UNN4 478 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 MAB21L2Q9Y586 359 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 MMP24Q9Y5R2 645 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 POMT1Q9Y6A1 747 aa8.45□□□□□ -1.06
CLK3-205ENST00000561673 MGAM2Q2M2H8 2515 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 A0A1B0GTI1 187 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 A6NIN4 97 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 OR5B21A6NL26 309 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 LOC110117498-PIK3R3F6TDL0 507 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 RNASEK-C17orf49H0YIS7 233 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 MTRF1O75570 445 aaKnown RBP8.44□□□□□ -1.06
CLK3-205ENST00000561673 FCGR1AP12314 374 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 RAG2P55895 527 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 CLVS2Q5SYC1 327 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 ZNF684Q5T5D7 378 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 BCL2L15Q5TBC7 163 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 TMEM42Q69YG0 159 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 C1orf122Q6ZSJ8 110 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 Q6ZSR3 168 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 SSX6Q7RTT6 188 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 LDLRAD3Q86YD5 345 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 OR14K1Q8NGZ2 314 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 NPRL2Q8WTW4 380 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 TNFRSF14Q92956 283 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 SDSLQ96GA7 329 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 CENPNQ96H22 339 aaPredicted RBP8.44□□□□□ -1.06
CLK3-205ENST00000561673 ZNF488Q96MN9 340 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 TBX5Q99593 518 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 SLITRK2Q9H156 845 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 MOB1AQ9H8S9 216 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 ELL3Q9HB65 397 aaPredicted RBP8.44□□□□□ -1.06
CLK3-205ENST00000561673 GPR173Q9NS66 373 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 RASL12Q9NYN1 266 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 WARS2Q9UGM6 360 aaKnown RBP8.44□□□□□ -1.06
CLK3-205ENST00000561673 ENOPH1Q9UHY7 261 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 OAZ3Q9UMX2 235 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 SLC22A13Q9Y226 551 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 FAM96BQ9Y3D0 163 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms