RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 ETV1P50549 477 aa16.6■□□□□ 0.25
TSPAN3-210ENST00000561277 AQP4P55087 323 aa16.6■□□□□ 0.25
TSPAN3-210ENST00000561277 ALKBH1Q13686 389 aaKnown RBP16.6■□□□□ 0.25
TSPAN3-210ENST00000561277 WDR25Q64LD2 544 aaPredicted RBP16.6■□□□□ 0.25
TSPAN3-210ENST00000561277 C1orf229Q6ZS94 237 aaPredicted RBP16.6■□□□□ 0.25
TSPAN3-210ENST00000561277 ZNF676Q8N7Q3 588 aa16.6■□□□□ 0.25
TSPAN3-210ENST00000561277 CCDC54Q8NEL0 328 aa16.6■□□□□ 0.25
TSPAN3-210ENST00000561277 OR10Z1Q8NGY1 313 aa16.6■□□□□ 0.25
TSPAN3-210ENST00000561277 SNTG1Q9NSN8 517 aa16.6■□□□□ 0.25
TSPAN3-210ENST00000561277 ERVK-18Q9QC07 812 aa16.6■□□□□ 0.25
TSPAN3-210ENST00000561277 POLR3KQ9Y2Y1 108 aaPredicted RBP16.6■□□□□ 0.25
TSPAN3-210ENST00000561277 MXRA5Q9NR99 2828 aa16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 PPIAL4CA0A0B4J2A2 164 aa16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 FAM230AA0A1W2PPH8 454 aa16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 OR4C45A6NMZ5 311 aa16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 TMPRSS2O15393 492 aa16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 NDUFA2O43678 99 aa16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 ISG15P05161 165 aa16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 MUC1P15941 1255 aaPredicted RBP16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 DCKP27707 260 aa16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 CCR9P51686 369 aa16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 GBX2P52951 348 aaPredicted RBP16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 KRTAP21-3Q3LHN1 58 aa16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 ZNF841Q6ZN19 808 aa16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 OR5T2Q8NGG2 359 aa16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 OR51A4Q8NGJ6 313 aa16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 OR10AC1Q8NH08 325 aa16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 AQP3Q92482 292 aa16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 TFAP2CQ92754 450 aa16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 JAM3Q9BX67 310 aa16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 RASSF4Q9H2L5 321 aa16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 SMURF1Q9HCE7 757 aa16.59■□□□□ 0.25
TSPAN3-210ENST00000561277 PQLC2LA1A4F0 135 aa16.58■□□□□ 0.24
TSPAN3-210ENST00000561277 TNFRSF13BO14836 293 aaPredicted RBP16.58■□□□□ 0.24
TSPAN3-210ENST00000561277 XPNPEP2O43895 674 aa16.58■□□□□ 0.24
TSPAN3-210ENST00000561277 ZNF20P17024 532 aa16.58■□□□□ 0.24
TSPAN3-210ENST00000561277 MYL12AP19105 171 aa16.58■□□□□ 0.24
TSPAN3-210ENST00000561277 UBE2V2Q15819 145 aa16.58■□□□□ 0.24
TSPAN3-210ENST00000561277 OR2G6Q5TZ20 316 aa16.58■□□□□ 0.24
TSPAN3-210ENST00000561277 ZNF573Q86YE8 665 aa16.58■□□□□ 0.24
TSPAN3-210ENST00000561277 ADAT3Q96EY9 351 aaPredicted RBP16.58■□□□□ 0.24
TSPAN3-210ENST00000561277 CCL13Q99616 98 aa16.58■□□□□ 0.24
TSPAN3-210ENST00000561277 CHST5Q9GZS9 411 aa16.58■□□□□ 0.24
TSPAN3-210ENST00000561277 HHLA2Q9UM44 414 aa16.58■□□□□ 0.24
TSPAN3-210ENST00000561277 SLC7A11Q9UPY5 501 aa16.58■□□□□ 0.24
TSPAN3-210ENST00000561277 INSIG2Q9Y5U4 225 aa16.58■□□□□ 0.24
TSPAN3-210ENST00000561277 A0A1B0GW55 424 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 GATBO75879 557 aaKnown RBP16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 DUX4L2P0CJ85 424 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 DUX4L3P0CJ86 424 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 DUX4L4P0CJ87 422 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 DUX4L5P0CJ88 424 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 DUX4L6P0CJ89 424 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 DUX4L7P0CJ90 424 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 GLRA1P23415 457 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 GTF2A1P52655 376 aaPredicted RBP16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 MRPL28Q13084 256 aaKnown RBP16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 STUMQ69YW2 141 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 LAIR2Q6ISS4 152 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 DUX4L9Q6RFH8 374 aaPredicted RBP16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 BTNL3Q6UXE8 466 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 FAM216BQ8N7L0 139 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 BPIFB6Q8NFQ5 453 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 OR13C3Q8NGS6 347 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 ZNF671Q8TAW3 534 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 FGGYQ96C11 551 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 C12orf43Q96C57 262 aaKnown RBP16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 ZNF488Q96MN9 340 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 MRI1Q9BV20 369 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 DUX4Q9UBX2 424 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 OPN4Q9UHM6 478 aa16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 DIMT1Q9UNQ2 313 aaKnown RBP16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 EXOSC1Q9Y3B2 195 aaKnown RBP16.57■□□□□ 0.24
TSPAN3-210ENST00000561277 IGHV2-70DA0A0C4DH43 119 aa16.56■□□□□ 0.24
TSPAN3-210ENST00000561277 J3QT63 122 aa16.56■□□□□ 0.24
TSPAN3-210ENST00000561277 SYNGR1O43759 233 aa16.56■□□□□ 0.24
TSPAN3-210ENST00000561277 ZFPL1O95159 310 aa16.56■□□□□ 0.24
TSPAN3-210ENST00000561277 SERPINA3P01011 423 aa16.56■□□□□ 0.24
TSPAN3-210ENST00000561277 TFF1P04155 84 aa16.56■□□□□ 0.24
TSPAN3-210ENST00000561277 NPY4RP50391 375 aa16.56■□□□□ 0.24
TSPAN3-210ENST00000561277 TMPRSS11AQ6ZMR5 421 aa16.56■□□□□ 0.24
TSPAN3-210ENST00000561277 ANGPTL5Q86XS5 388 aa16.56■□□□□ 0.24
TSPAN3-210ENST00000561277 BATF2Q8N1L9 274 aa16.56■□□□□ 0.24
TSPAN3-210ENST00000561277 PP6455Q8WZ26 134 aa16.56■□□□□ 0.24
TSPAN3-210ENST00000561277 GGHQ92820 318 aa16.56■□□□□ 0.24
TSPAN3-210ENST00000561277 C10orf35Q96D05 121 aa16.56■□□□□ 0.24
TSPAN3-210ENST00000561277 TMEM80Q96HE8 168 aa16.56■□□□□ 0.24
TSPAN3-210ENST00000561277 PDCD1LG2Q9BQ51 273 aa16.56■□□□□ 0.24
TSPAN3-210ENST00000561277 COMMD4Q9H0A8 199 aa16.56■□□□□ 0.24
TSPAN3-210ENST00000561277 CLEC2DQ9UHP7 191 aa16.56■□□□□ 0.24
TSPAN3-210ENST00000561277 CAB39Q9Y376 341 aaPredicted RBP16.56■□□□□ 0.24
TSPAN3-210ENST00000561277 C22orf46C9J442 243 aa16.55■□□□□ 0.24
TSPAN3-210ENST00000561277 DVL1O14640 695 aa16.55■□□□□ 0.24
TSPAN3-210ENST00000561277 PLATP00750 562 aa16.55■□□□□ 0.24
TSPAN3-210ENST00000561277 CCDC159P0C7I6 412 aa16.55■□□□□ 0.24
TSPAN3-210ENST00000561277 PAX2Q02962 417 aa16.55■□□□□ 0.24
TSPAN3-210ENST00000561277 ST3GAL4Q11206 333 aa16.55■□□□□ 0.24
TSPAN3-210ENST00000561277 MED21Q13503 144 aa16.55■□□□□ 0.24
TSPAN3-210ENST00000561277 CNN3Q15417 329 aaKnown RBP16.55■□□□□ 0.24
TSPAN3-210ENST00000561277 CALHM1Q8IU99 346 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms