RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 CFAP77Q6ZQR2 320 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 TMPRSS11FQ6ZWK6 438 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 TSEN54Q7Z6J9 526 aaKnown RBP7.54□□□□□ -1.2
HERC1-210ENST00000560897 CYP4Z1Q86W10 505 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 ZNRF1Q8ND25 227 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 GPR32P1Q8NGA4 272 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 OR4D11Q8NGI4 311 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 OR2AJ1Q8NGZ0 328 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 CCDC124Q96CT7 223 aaKnown RBP7.54□□□□□ -1.2
HERC1-210ENST00000560897 BPIFA2Q96DR5 249 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 MICU1Q9BPX6 476 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 A4GNTQ9UNA3 340 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 SAMD4AQ9UPU9 718 aaKnown RBP7.54□□□□□ -1.2
HERC1-210ENST00000560897 SNX13Q9Y5W8 968 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 LHFPL6Q9Y693 200 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 HTR3EA5X5Y0 456 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 FAM90A22PA8MWA6 464 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 FXYD1O00168 92 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 AKR7A2O43488 359 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 OR2F2O95006 317 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 OR5F1O95221 314 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 SERPINA1P01009 418 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 HSD17B1P14061 328 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 CCL3L1P16619 93 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 JUNBP17275 347 aaPredicted RBP7.53□□□□□ -1.2
HERC1-210ENST00000560897 GLRA1P23415 457 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 DDOSTP39656 456 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 HIST1H3AP68431 136 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 KRR1Q13601 381 aaKnown RBP7.53□□□□□ -1.2
HERC1-210ENST00000560897 TRIM25Q14258 630 aaKnown RBP7.53□□□□□ -1.2
HERC1-210ENST00000560897 SNAPC1Q16533 368 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 MEP1BQ16820 701 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 DEFB136Q30KP8 78 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 SNAI3Q3KNW1 292 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 KRTAP27-1Q3LI81 207 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 GLYATL3Q5SZD4 288 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 HIST2H3PS2Q5TEC6 136 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 MINOS1Q5TGZ0 78 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 C1orf146Q5VVC0 180 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 LCNL1Q6ZST4 164 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 HIST2H3AQ71DI3 136 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 WDR86Q86TI4 376 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 OAFQ86UD1 273 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 NAA40Q86UY6 237 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 TSPYL5Q86VY4 417 aaPredicted RBP7.53□□□□□ -1.2
HERC1-210ENST00000560897 SPATA24Q86W54 205 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 LINC00346Q8IVM7 164 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 OR6V1Q8N148 313 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 LRRC75AQ8NAA5 344 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 CYB561A3Q8NBI2 242 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 Q96M85 177 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 POLR2J2Q9GZM3 115 aaKnown RBP7.53□□□□□ -1.2
HERC1-210ENST00000560897 POLR2J3Q9H1A7 115 aaKnown RBP7.53□□□□□ -1.2
HERC1-210ENST00000560897 IKZF5Q9H5V7 419 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 ABCD2Q9UBJ2 740 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 KCNG2Q9UJ96 466 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 SH3GLB1Q9Y371 365 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 ADAM18Q9Y3Q7 739 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 MINOS1-NBL1R4GNA1 71 aa7.53□□□□□ -1.2
HERC1-210ENST00000560897 SERPINE3A8MV23 424 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 EFCAB9A8MZ26 197 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 PRR23D1E9PI22 279 aaPredicted RBP7.52□□□□□ -1.21
HERC1-210ENST00000560897 GNGT2O14610 69 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 CD14P08571 375 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 PRR23D2P0DMB1 279 aaPredicted RBP7.52□□□□□ -1.21
HERC1-210ENST00000560897 GP9P14770 177 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 NCK1P16333 377 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 HOXB9P17482 250 aaPredicted RBP7.52□□□□□ -1.21
HERC1-210ENST00000560897 CRABP1P29762 137 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 SLC9A3P48764 834 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 POU3F4P49335 361 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 SELENOWP63302 87 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 FLOT2Q14254 428 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 KCNMB1Q16558 191 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 SRSF7Q16629 238 aaKnown RBP eCLIP7.52□□□□□ -1.21
HERC1-210ENST00000560897 RSPO1Q2MKA7 263 aaPredicted RBP7.52□□□□□ -1.21
HERC1-210ENST00000560897 RFX4Q33E94 735 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 FAM98BQ52LJ0 330 aaKnown RBP7.52□□□□□ -1.21
HERC1-210ENST00000560897 CYBRD1Q53TN4 286 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 TMEM200BQ69YZ2 307 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 KCTD8Q6ZWB6 473 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 CCDC80Q76M96 950 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 RRM2BQ7LG56 351 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 ZNF429Q86V71 674 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 FTMTQ8N4E7 242 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 FAM156AQ8NDB6 213 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 OR11H6Q8NGC7 330 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 OR4M1Q8NGD0 313 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 OR4C15Q8NGM1 316 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 OR2T27Q8NH04 317 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 RSRC1Q96IZ7 334 aaKnown RBP7.52□□□□□ -1.21
HERC1-210ENST00000560897 RBM14Q96PK6 669 aaKnown RBP7.52□□□□□ -1.21
HERC1-210ENST00000560897 RTL8AQ9BWD3 113 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 PAPOLGQ9BWT3 736 aaKnown RBP7.52□□□□□ -1.21
HERC1-210ENST00000560897 YY1AP1Q9H869 796 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 ACTR3BQ9P1U1 418 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 RIMS3Q9UJD0 308 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 N6AMT1Q9Y5N5 214 aa7.52□□□□□ -1.21
HERC1-210ENST00000560897 TMEM210A6NLX4 147 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 SLC1A7O00341 560 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms