RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 TNFRSF14Q92956 283 aa14.55□□□□□ -0.08
HDDC3-205ENST00000559898 UBE2FQ969M7 185 aa14.55□□□□□ -0.08
HDDC3-205ENST00000559898 C12orf43Q96C57 262 aaKnown RBP14.55□□□□□ -0.08
HDDC3-205ENST00000559898 AP4S1Q9Y587 144 aa14.55□□□□□ -0.08
HDDC3-205ENST00000559898 KPTNQ9Y664 436 aa14.55□□□□□ -0.08
HDDC3-205ENST00000559898 MEGF8Q7Z7M0 2845 aa14.54□□□□□ -0.08
HDDC3-205ENST00000559898 SIGLEC5O15389 551 aa14.54□□□□□ -0.08
HDDC3-205ENST00000559898 WIPF1O43516 503 aa14.54□□□□□ -0.08
HDDC3-205ENST00000559898 RPP14O95059 124 aaKnown RBP14.54□□□□□ -0.08
HDDC3-205ENST00000559898 ACAA1P09110 424 aaPredicted RBP14.54□□□□□ -0.08
HDDC3-205ENST00000559898 NDUFB7P17568 137 aa14.54□□□□□ -0.08
HDDC3-205ENST00000559898 ERVFRD-1P60508 538 aa14.54□□□□□ -0.08
HDDC3-205ENST00000559898 GNG3P63215 75 aa14.54□□□□□ -0.08
HDDC3-205ENST00000559898 IL13RA1P78552 427 aa14.54□□□□□ -0.08
HDDC3-205ENST00000559898 C1orf146Q5VVC0 180 aa14.54□□□□□ -0.08
HDDC3-205ENST00000559898 NXNL2Q5VZ03 156 aa14.54□□□□□ -0.08
HDDC3-205ENST00000559898 PLCXD3Q63HM9 321 aa14.54□□□□□ -0.08
HDDC3-205ENST00000559898 HCP5Q6MZN7 132 aa14.54□□□□□ -0.08
HDDC3-205ENST00000559898 SHISA2Q6UWI4 295 aa14.54□□□□□ -0.08
HDDC3-205ENST00000559898 CD177Q8N6Q3 437 aa14.54□□□□□ -0.08
HDDC3-205ENST00000559898 OR51G2Q8NGK0 314 aa14.54□□□□□ -0.08
HDDC3-205ENST00000559898 OR14K1Q8NGZ2 314 aa14.54□□□□□ -0.08
HDDC3-205ENST00000559898 C8orf46Q8TAG6 207 aa14.54□□□□□ -0.08
HDDC3-205ENST00000559898 TEX12Q9BXU0 123 aa14.54□□□□□ -0.08
HDDC3-205ENST00000559898 NOX4Q9NPH5 578 aa14.54□□□□□ -0.08
HDDC3-205ENST00000559898 SLC25A10Q9UBX3 287 aaPredicted RBP14.54□□□□□ -0.08
HDDC3-205ENST00000559898 OR52A1Q9UKL2 312 aa14.54□□□□□ -0.08
HDDC3-205ENST00000559898 ACOD1A6NK06 481 aa14.53□□□□□ -0.08
HDDC3-205ENST00000559898 SAC3D1A6NKF1 404 aa14.53□□□□□ -0.08
HDDC3-205ENST00000559898 LOC110117498-PIK3R3F6TDL0 507 aa14.53□□□□□ -0.08
HDDC3-205ENST00000559898 ZNF254O75437 659 aa14.53□□□□□ -0.08
HDDC3-205ENST00000559898 FASP25445 335 aa14.53□□□□□ -0.08
HDDC3-205ENST00000559898 IER3P46695 156 aa14.53□□□□□ -0.08
HDDC3-205ENST00000559898 BPIFB3P59826 476 aa14.53□□□□□ -0.08
HDDC3-205ENST00000559898 RIPPLY1Q0D2K3 151 aa14.53□□□□□ -0.08
HDDC3-205ENST00000559898 TAF9Q16594 264 aa14.53□□□□□ -0.08
HDDC3-205ENST00000559898 LRRC10Q5BKY1 277 aa14.53□□□□□ -0.08
HDDC3-205ENST00000559898 PRR31Q5SQ13 230 aa14.53□□□□□ -0.08
HDDC3-205ENST00000559898 THAP5Q7Z6K1 395 aa14.53□□□□□ -0.08
HDDC3-205ENST00000559898 ELMOD2Q8IZ81 293 aa14.53□□□□□ -0.08
HDDC3-205ENST00000559898 FTMTQ8N4E7 242 aa14.53□□□□□ -0.08
HDDC3-205ENST00000559898 ASB17Q8WXJ9 295 aa14.53□□□□□ -0.08
HDDC3-205ENST00000559898 RNF166Q96A37 237 aaPredicted RBP14.53□□□□□ -0.08
HDDC3-205ENST00000559898 DUS3LQ96G46 650 aaKnown RBP14.53□□□□□ -0.08
HDDC3-205ENST00000559898 HIST1H2AAQ96QV6 131 aa14.53□□□□□ -0.08
HDDC3-205ENST00000559898 OAZ3Q9UMX2 235 aa14.53□□□□□ -0.08
HDDC3-205ENST00000559898 R4GMQ9 66 aa14.53□□□□□ -0.08
HDDC3-205ENST00000559898 V9GYS6 101 aa14.53□□□□□ -0.08
HDDC3-205ENST00000559898 NKX6-3A6NJ46 265 aa14.52□□□□□ -0.09
HDDC3-205ENST00000559898 KCNAB3O43448 404 aa14.52□□□□□ -0.09
HDDC3-205ENST00000559898 DHRS3O75911 302 aa14.52□□□□□ -0.09
HDDC3-205ENST00000559898 NRASP01111 189 aa14.52□□□□□ -0.09
HDDC3-205ENST00000559898 RAG2P55895 527 aa14.52□□□□□ -0.09
HDDC3-205ENST00000559898 SNCBQ16143 134 aa14.52□□□□□ -0.09
HDDC3-205ENST00000559898 ZNF829Q3KNS6 432 aaPredicted RBP14.52□□□□□ -0.09
HDDC3-205ENST00000559898 TMEM42Q69YG0 159 aa14.52□□□□□ -0.09
HDDC3-205ENST00000559898 ACP7Q6ZNF0 438 aa14.52□□□□□ -0.09
HDDC3-205ENST00000559898 OR5A2Q8NGI9 324 aa14.52□□□□□ -0.09
HDDC3-205ENST00000559898 RIBC2Q9H4K1 309 aa14.52□□□□□ -0.09
HDDC3-205ENST00000559898 ABCB9Q9NP78 766 aa14.52□□□□□ -0.09
HDDC3-205ENST00000559898 C19orf12Q9NSK7 152 aa14.52□□□□□ -0.09
HDDC3-205ENST00000559898 CLN6Q9NWW5 311 aa14.52□□□□□ -0.09
HDDC3-205ENST00000559898 MGAM2Q2M2H8 2515 aa14.52□□□□□ -0.09
HDDC3-205ENST00000559898 A0A1B0GVI7 797 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 A0A1W2PQL4 384 aaPredicted RBP14.51□□□□□ -0.09
HDDC3-205ENST00000559898 SLC22A31A6NKX4 558 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 ZNF670-ZNF695F2Z2N8 137 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 F8VVB4 439 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 F8VWA3 439 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 GPR137BO60478 399 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 ZNF684Q5T5D7 378 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 BCL2L15Q5TBC7 163 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 ASRGL1Q7L266 308 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 ANGPTL5Q86XS5 388 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 LDLRAD3Q86YD5 345 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 CALHM1Q8IU99 346 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 ZDHHC13Q8IUH4 622 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 TMEM185AQ8NFB2 350 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 WFDC12Q8WWY7 111 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 PYDC1Q8WXC3 89 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 AJUBAQ96IF1 538 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 DNTTIP1Q9H147 329 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 H2AFY2Q9P0M6 372 aaPredicted RBP14.51□□□□□ -0.09
HDDC3-205ENST00000559898 AASSQ9UDR5 926 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 ENPP5Q9UJA9 477 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 TMEM14AQ9Y6G1 99 aa14.51□□□□□ -0.09
HDDC3-205ENST00000559898 PQLC2LA1A4F0 135 aa14.5□□□□□ -0.09
HDDC3-205ENST00000559898 MEX3AA1L020 520 aaKnown RBP14.5□□□□□ -0.09
HDDC3-205ENST00000559898 RFPL4AA6NLU0 287 aa14.5□□□□□ -0.09
HDDC3-205ENST00000559898 RFPL4AL1F8VTS6 287 aa14.5□□□□□ -0.09
HDDC3-205ENST00000559898 NPFFO15130 113 aa14.5□□□□□ -0.09
HDDC3-205ENST00000559898 MTRF1O75570 445 aaKnown RBP14.5□□□□□ -0.09
HDDC3-205ENST00000559898 HAAOP46952 286 aa14.5□□□□□ -0.09
HDDC3-205ENST00000559898 HIST2H2BDQ6DRA6 164 aa14.5□□□□□ -0.09
HDDC3-205ENST00000559898 Q6ZSR3 168 aa14.5□□□□□ -0.09
HDDC3-205ENST00000559898 CATSPERDQ86XM0 798 aa14.5□□□□□ -0.09
HDDC3-205ENST00000559898 YIPF7Q8N8F6 280 aa14.5□□□□□ -0.09
HDDC3-205ENST00000559898 POC1AQ8NBT0 407 aa14.5□□□□□ -0.09
HDDC3-205ENST00000559898 TRMT10AQ8TBZ6 339 aaKnown RBP14.5□□□□□ -0.09
HDDC3-205ENST00000559898 NPRL2Q8WTW4 380 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms