RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 MPPED2Q15777 294 aa8.5□□□□□ -1.05
USP3-216ENST00000559873 UBE2V2Q15819 145 aa8.5□□□□□ -1.05
USP3-216ENST00000559873 FAM76BQ5HYJ3 339 aa8.5□□□□□ -1.05
USP3-216ENST00000559873 HAGHLQ6PII5 290 aaPredicted RBP8.5□□□□□ -1.05
USP3-216ENST00000559873 WDR86Q86TI4 376 aa8.5□□□□□ -1.05
USP3-216ENST00000559873 TGIF2LYQ8IUE0 185 aa8.5□□□□□ -1.05
USP3-216ENST00000559873 PHC2Q8IXK0 858 aa8.5□□□□□ -1.05
USP3-216ENST00000559873 NKAIN3Q8N8D7 197 aa8.5□□□□□ -1.05
USP3-216ENST00000559873 PNLDC1Q8NA58 520 aaKnown RBP8.5□□□□□ -1.05
USP3-216ENST00000559873 OR13C5Q8NGS8 318 aa8.5□□□□□ -1.05
USP3-216ENST00000559873 ZNF420Q8TAQ5 688 aaPredicted RBP8.5□□□□□ -1.05
USP3-216ENST00000559873 LRRC29Q8WV35 223 aa8.5□□□□□ -1.05
USP3-216ENST00000559873 PHYHIPQ92561 330 aa8.5□□□□□ -1.05
USP3-216ENST00000559873 DERL3Q96Q80 235 aa8.5□□□□□ -1.05
USP3-216ENST00000559873 PKIBQ9C010 78 aa8.5□□□□□ -1.05
USP3-216ENST00000559873 OR51I2Q9H344 312 aa8.5□□□□□ -1.05
USP3-216ENST00000559873 TAS2R4Q9NYW5 299 aa8.5□□□□□ -1.05
USP3-216ENST00000559873 WIPI2Q9Y4P8 454 aa8.5□□□□□ -1.05
USP3-216ENST00000559873 CACNG2Q9Y698 323 aa8.5□□□□□ -1.05
USP3-216ENST00000559873 ITPR3Q14573 2671 aa8.5□□□□□ -1.05
USP3-216ENST00000559873 TANC2Q9HCD6 1990 aa8.5□□□□□ -1.05
USP3-216ENST00000559873 PPIAL4EA0A075B759 164 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 TRIM64BA6NI03 449 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 VWC2LB2RUY7 222 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 PPIAL4DF5H284 164 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 GPX5O75715 221 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 FSTL3O95633 263 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 CYB5R3P00387 301 aaPredicted RBP8.49□□□□□ -1.05
USP3-216ENST00000559873 PPIAL4FP0DN26 164 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 USF1P22415 310 aaPredicted RBP8.49□□□□□ -1.05
USP3-216ENST00000559873 RPS11P62280 158 aaKnown RBP eCLIP8.49□□□□□ -1.05
USP3-216ENST00000559873 IL24Q13007 206 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 DOC2BQ14184 412 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 SMIM21Q3B7S5 101 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 TIMM50Q3ZCQ8 353 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 TMEM155Q4W5P6 130 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 ACSM3Q53FZ2 586 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 HSD17B12Q53GQ0 312 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 SPRNQ5BIV9 151 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 SYT6Q5T7P8 510 aaPredicted RBP8.49□□□□□ -1.05
USP3-216ENST00000559873 FIP1L1Q6UN15 594 aaKnown RBP8.49□□□□□ -1.05
USP3-216ENST00000559873 WDR82Q6UXN9 313 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 Q8IYB0 196 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 SCCPDHQ8NBX0 429 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 AQP3Q92482 292 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 RPL3LQ92901 407 aaKnown RBP8.49□□□□□ -1.05
USP3-216ENST00000559873 RAB39BQ96DA2 213 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 GPER1Q99527 375 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 GAL3ST1Q99999 423 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 REG4Q9BYZ8 158 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 PPP1R3EQ9H7J1 279 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 TCF7L1Q9HCS4 588 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 TMEM138Q9NPI0 162 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 TREM2Q9NZC2 230 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 DNAJB11Q9UBS4 358 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 FOXJ3Q9UPW0 622 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 PPIAL4AQ9Y536 164 aa8.49□□□□□ -1.05
USP3-216ENST00000559873 FLNAP21333 2647 aaKnown RBP8.49□□□□□ -1.05
USP3-216ENST00000559873 TRBV5-7A0A0A0MS05 114 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 TRAV38-1A0A0B4J264 116 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 IGKV1-9A0A0C4DH69 117 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 MAGEA13PA6NCF6 341 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 OOEPA6NGQ2 149 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 CYSRT1A8MQ03 144 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 SRRM5B3KS81 715 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 RNF223E7ERA6 249 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 LGALS8O00214 317 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 IGHV2-70P01814 119 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 ALDOBP05062 364 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 MUC1P15941 1255 aaPredicted RBP8.48□□□□□ -1.05
USP3-216ENST00000559873 GALP22466 123 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 GLRA1P23415 457 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 CPT2P23786 658 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 MPZP25189 248 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 BDKRB2P30411 391 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 CFHR2P36980 270 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 TGFBR2P37173 567 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 RANBP1P43487 201 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 POU3F4P49335 361 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 RPS25P62851 125 aaKnown RBP8.48□□□□□ -1.05
USP3-216ENST00000559873 LOXL1Q08397 574 aaPredicted RBP8.48□□□□□ -1.05
USP3-216ENST00000559873 MICBQ29980 383 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 AVPI1Q5T686 147 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 DDI2Q5TDH0 399 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 ZNF529Q6P280 563 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 ZNF826PQ6ZT77 177 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 NLRC3Q7RTR2 1065 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 CEACAM19Q7Z692 300 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 MKXQ8IYA7 352 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 GCSAMQ8N6F7 178 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 BOLLQ8N9W6 283 aaKnown RBP8.48□□□□□ -1.05
USP3-216ENST00000559873 TMEM203Q969S6 136 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 MUL1Q969V5 352 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 C12orf43Q96C57 262 aaKnown RBP8.48□□□□□ -1.05
USP3-216ENST00000559873 S100A13Q99584 98 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 MRPS26Q9BYN8 205 aaKnown RBP8.48□□□□□ -1.05
USP3-216ENST00000559873 FGF23Q9GZV9 251 aaPredicted RBP8.48□□□□□ -1.05
USP3-216ENST00000559873 NOX4Q9NPH5 578 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 RASL12Q9NYN1 266 aa8.48□□□□□ -1.05
USP3-216ENST00000559873 PCDHB10Q9UN67 800 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms