RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 MZT1Q08AG7 82 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 TRIM25Q14258 630 aaKnown RBP6.05□□□□□ -1.44
SPG11-213ENST00000558988 PCK2Q16822 640 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 DMRTC1Q5HYR2 192 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 WDR38Q5JTN6 314 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 C16orf87Q6PH81 154 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 ZNF841Q6ZN19 808 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 WDR86Q86TI4 376 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 SPATA24Q86W54 205 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 HS3ST5Q8IZT8 346 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 GCSAMQ8N6F7 178 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 KIR3DL3Q8N743 410 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 PNLDC1Q8NA58 520 aaKnown RBP6.05□□□□□ -1.44
SPG11-213ENST00000558988 CCDC197Q8NCU1 140 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 FAM81AQ8TBF8 368 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 TMIGD2Q96BF3 282 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 SGK3Q96BR1 496 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 TBX15Q96SF7 602 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 GPHA2Q96T91 129 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 CHID1Q9BWS9 393 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 DGCR6LQ9BY27 220 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 NMNAT2Q9BZQ4 307 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 SEMA6AQ9H2E6 1030 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 MUC13Q9H3R2 512 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 IFT22Q9H7X7 185 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 CMC2Q9NRP2 79 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 MRPL15Q9P015 296 aaKnown RBP6.05□□□□□ -1.44
SPG11-213ENST00000558988 PDP1Q9P0J1 537 aaPredicted RBP6.05□□□□□ -1.44
SPG11-213ENST00000558988 PRPF19Q9UMS4 504 aaKnown RBP6.05□□□□□ -1.44
SPG11-213ENST00000558988 GTF2A1LQ9UNN4 478 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 RHBDD3Q9Y3P4 386 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 A0A0U1RQK1 487 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 CENPVL3A0A0U1RRI6 287 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 hCG_38984A0A1B0GV85 526 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 A0A1B0GWJ7 208 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 ANXA2P2A6NMY6 339 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 ZNF850A8MQ14 1090 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 P2RY10O00398 339 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 CDIPTO14735 213 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 GLCEO94923 617 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 LYNP07948 512 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 RAP2AP10114 183 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 PRKACGP22612 351 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 CALB2P22676 271 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 CPT2P23786 658 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 NPY4RP50391 375 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 BLVRAP53004 296 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 HCCSP53701 268 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 RAG2P55895 527 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 PRDX4Q13162 271 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 GINS1Q14691 196 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 MICBQ29980 383 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 LINC01590Q5TEZ4 76 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 TMEM236Q5W0B7 351 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 C17orf107Q6ZR85 190 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 SHFQ7M4L6 423 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 VMO1Q7Z5L0 202 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 TMEM179BQ7Z7N9 219 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 CPOQ8IVL8 374 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 TIGD4Q8IY51 512 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 ADGRG5Q8IZF4 528 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 SPERTQ8NA61 448 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 BBS1Q8NFJ9 593 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 OR1M1Q8NGA1 313 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 OR52H1Q8NGJ2 320 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 SVIPQ8NHG7 77 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 PIGCQ92535 297 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 RPL3LQ92901 407 aaKnown RBP6.04□□□□□ -1.44
SPG11-213ENST00000558988 ASB9Q96DX5 294 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 WDFY2Q96P53 400 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 ARPC5LQ9BPX5 153 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 MICU1Q9BPX6 476 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 CHIAQ9BZP6 476 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 OPA3Q9H6K4 179 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 ZNF556Q9HAH1 456 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 TRIM36Q9NQ86 728 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 SIRT7Q9NRC8 400 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 ZNF319Q9P2F9 582 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 KLHDC2Q9Y2U9 406 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 FAM96BQ9Y3D0 163 aa6.04□□□□□ -1.44
SPG11-213ENST00000558988 IGHV1-69DA0A0B4J2H0 117 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 A0A1W2PQ09 198 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 UBE2QL1A1L167 161 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 NKX6-3A6NJ46 265 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 SRRM5B3KS81 715 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 CLDN34H7C241 214 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 ACOT8O14734 319 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 KCNAB3O43448 404 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 AKR7A2O43488 359 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 NDUFB3O43676 98 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 NDUFA2O43678 99 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 FCN3O75636 299 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 FAM107AO95990 144 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 IGHV1-69P01742 117 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 IGHV4-59P01825 116 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 APOC1P02654 83 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 MELTFP08582 738 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 PPIAL4GP0DN37 164 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 NDUFB7P17568 137 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 CFL1P23528 166 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms