RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 GBX2P52951 348 aaPredicted RBP7.07□□□□□ -1.28
TPM1-213ENST00000558400 OR12D2P58182 307 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 BPIFB3P59826 476 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 CSNK2BP67870 215 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 ADARB1P78563 741 aaKnown RBP7.07□□□□□ -1.28
TPM1-213ENST00000558400 PRR20EP86478 221 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 PRR20CP86479 221 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 PRR20DP86480 221 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 PRR20BP86481 221 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 PRR20AP86496 221 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 TP53I3Q53FA7 332 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 WDR38Q5JTN6 314 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 CEP78Q5JTW2 689 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 OGFRL1Q5TC84 451 aaPredicted RBP7.07□□□□□ -1.28
TPM1-213ENST00000558400 ZNF691Q5VV52 312 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 TMPRSS11AQ6ZMR5 421 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 ZNF841Q6ZN19 808 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 C1QL2Q7Z5L3 287 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 WDR86Q86TI4 376 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 LHFPL3Q86UP9 236 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 FAM90A1Q86YD7 464 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 PNLDC1Q8NA58 520 aaKnown RBP7.07□□□□□ -1.28
TPM1-213ENST00000558400 ZNF418Q8TF45 676 aaPredicted RBP7.07□□□□□ -1.28
TPM1-213ENST00000558400 HPSE2Q8WWQ2 592 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 PP6455Q8WZ26 134 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 RPL3LQ92901 407 aaKnown RBP7.07□□□□□ -1.28
TPM1-213ENST00000558400 TMIGD2Q96BF3 282 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 JAM3Q9BX67 310 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 METTL17Q9H7H0 456 aaPredicted RBP7.07□□□□□ -1.28
TPM1-213ENST00000558400 PPP1R3EQ9H7J1 279 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 FGF20Q9NP95 211 aaPredicted RBP7.07□□□□□ -1.28
TPM1-213ENST00000558400 MMP26Q9NRE1 261 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 CHCHD3Q9NX63 227 aaKnown RBP7.07□□□□□ -1.28
TPM1-213ENST00000558400 ERVK13-1Q9NX77 482 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 HHLA2Q9UM44 414 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 POLDIP2Q9Y2S7 368 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 ANK2Q01484 3957 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 CUBNO60494 3623 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 TANC2Q9HCD6 1990 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 WNK2Q9Y3S1 2297 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 IGHV2-70DA0A0C4DH43 119 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 ANKRD61A6NGH8 418 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 NDUFB3O43676 98 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 TCF21O43680 179 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 NOS1APO75052 506 aaPredicted RBP7.06□□□□□ -1.28
TPM1-213ENST00000558400 AVPP01185 164 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 GYPAP02724 150 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 CCDC159P0C7I6 412 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 ADRA2CP18825 462 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 MYL12AP19105 171 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 GLRA1P23415 457 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 PEX2P28328 305 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 CD80P33681 288 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 CAPGP40121 348 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 HAAOP46952 286 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 TGM4P49221 684 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 SEC61A1P61619 476 aaKnown RBP7.06□□□□□ -1.28
TPM1-213ENST00000558400 ELF3P78545 371 aaPredicted RBP7.06□□□□□ -1.28
TPM1-213ENST00000558400 PAX2Q02962 417 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 SLC34A1Q06495 639 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 ALKBH1Q13686 389 aaKnown RBP7.06□□□□□ -1.28
TPM1-213ENST00000558400 CNN3Q15417 329 aaKnown RBP7.06□□□□□ -1.28
TPM1-213ENST00000558400 ODF4Q2M2E3 257 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 CCDC58Q4VC31 144 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 LRRC10Q5BKY1 277 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 HAGHLQ6PII5 290 aaPredicted RBP7.06□□□□□ -1.28
TPM1-213ENST00000558400 LYPD2Q6UXB3 125 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 C1orf229Q6ZS94 237 aaPredicted RBP7.06□□□□□ -1.28
TPM1-213ENST00000558400 IL17RELQ6ZVW7 336 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 USP43Q70EL4 1123 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 C8orf59Q8N0T1 100 aaPredicted RBP7.06□□□□□ -1.28
TPM1-213ENST00000558400 PRSS35Q8N3Z0 413 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 C19orf18Q8NEA5 215 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 DNAAF1Q8NEP3 725 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 OR52I1Q8NGK6 324 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 AQP3Q92482 292 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 PELI1Q96FA3 418 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 C4orf36Q96KX1 117 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 JMJD8Q96S16 334 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 NUDT16L1Q9BRJ7 211 aaKnown RBP7.06□□□□□ -1.28
TPM1-213ENST00000558400 ALG8Q9BVK2 526 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 PKIBQ9C010 78 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 VCX3BQ9H321 246 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 ACOXLQ9NUZ1 547 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 FRRS1LQ9P0K9 344 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 AASSQ9UDR5 926 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 MYRFQ9Y2G1 1151 aa7.06□□□□□ -1.28
TPM1-213ENST00000558400 CAB39Q9Y376 341 aaPredicted RBP7.06□□□□□ -1.28
TPM1-213ENST00000558400 PQLC2LA1A4F0 135 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 NKX6-3A6NJ46 265 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 TMEM212A6NML5 194 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 OR2AT4A6NND4 320 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 J3QT63 122 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 DVL1O14640 695 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 AKR7A2O43488 359 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 WBP4O75554 376 aaKnown RBP7.05□□□□□ -1.28
TPM1-213ENST00000558400 ALX3O95076 343 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 OCM2P0CE71 109 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 OCMP0CE72 109 aaPredicted RBP7.05□□□□□ -1.28
TPM1-213ENST00000558400 EPHA1P21709 976 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms