RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 SHOXO15266 292 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 TSC22D2O75157 780 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 RBBP9O75884 186 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 OR2A4O95047 310 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 HOXB4P17483 251 aaPredicted RBP8.9□□□□□ -0.99
TPM1-212ENST00000558347 FSTP19883 344 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 CD40P25942 277 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 KIR3DL2P43630 455 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 CAPZA1P52907 286 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 ATP5J2P56134 94 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 FMODQ06828 376 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 RBMS2Q15434 407 aaKnown RBP8.9□□□□□ -0.99
TPM1-212ENST00000558347 RAB11BQ15907 218 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 ETFDHQ16134 617 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 KCNMB1Q16558 191 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 PCK2Q16822 640 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 HIKESHIQ53FT3 197 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 KCTD18Q6PI47 426 aaPredicted RBP8.9□□□□□ -0.99
TPM1-212ENST00000558347 TMEM108Q6UXF1 575 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 FOXL2NBQ6ZUU3 175 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 DPY19L4Q7Z388 723 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 CCDC28AQ8IWP9 274 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 ZNF679Q8IYX0 411 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 PRSS35Q8N3Z0 413 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 C17orf78Q8N4C9 275 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 DNAAF1Q8NEP3 725 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 C1orf162Q8NEQ5 155 aaPredicted RBP8.9□□□□□ -0.99
TPM1-212ENST00000558347 SLC26A10Q8NG04 563 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 OR2T35Q8NGX2 323 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 OR6N1Q8NGY5 312 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 THEM6Q8WUY1 208 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 TMEM106AQ96A25 262 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 POM121Q96HA1 1249 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 ALKBH3Q96Q83 286 aaPredicted RBP8.9□□□□□ -0.99
TPM1-212ENST00000558347 OR2A7Q96R45 310 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 LINC00470Q9BZP3 86 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 MRPL22Q9NWU5 206 aaKnown RBP8.9□□□□□ -0.99
TPM1-212ENST00000558347 MGAT4CQ9UBM8 478 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 EIF3KQ9UBQ5 218 aaKnown RBP8.9□□□□□ -0.99
TPM1-212ENST00000558347 KLK11Q9UBX7 282 aa8.9□□□□□ -0.99
TPM1-212ENST00000558347 COA3Q9Y2R0 106 aaPredicted RBP8.9□□□□□ -0.99
TPM1-212ENST00000558347 ALPK2Q86TB3 2170 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 TRAV8-7A0A075B6U6 113 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 A0A0A6YYH2 397 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 LOC100289279A0A1B0GTE1 492 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 GGT3PA6NGU5 568 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 A6NJ64 397 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 E7EQL1 145 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 G3V3Q6 166 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 RGS11O94810 467 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 MELTFP08582 738 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 QDPRP09417 244 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 PTAFRP25105 342 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 LAP3P28838 519 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 SOX2P48431 317 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 ZNF81P51508 661 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 CLDN12P56749 244 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 TGFBR3Q03167 851 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 MPPED2Q15777 294 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 TMEM255AQ5JRV8 349 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 WDR38Q5JTN6 314 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 PHYHD1Q5SRE7 291 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 CARD17Q5XLA6 110 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 FAM166AQ6J272 317 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 CLEC9AQ6UXN8 241 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 Q6ZTK2 550 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 SERPINA12Q8IW75 414 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 CDH26Q8IXH8 852 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 ELMOD2Q8IZ81 293 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 BEST4Q8NFU0 473 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 ORAI1Q96D31 301 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 MS4A3Q96HJ5 214 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 CITED4Q96RK1 184 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 METTL17Q9H7H0 456 aaPredicted RBP8.89□□□□□ -0.99
TPM1-212ENST00000558347 NKIRAS2Q9NYR9 191 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 MRPL15Q9P015 296 aaKnown RBP8.89□□□□□ -0.99
TPM1-212ENST00000558347 ZNF107Q9UII5 783 aaPredicted RBP8.89□□□□□ -0.99
TPM1-212ENST00000558347 KCNG2Q9UJ96 466 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 FLVCR2Q9UPI3 526 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 AMDHD2Q9Y303 409 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 MAB21L2Q9Y586 359 aa8.89□□□□□ -0.99
TPM1-212ENST00000558347 UBE2QL1A1L167 161 aa8.88□□□□□ -0.99
TPM1-212ENST00000558347 MEGF11A6BM72 1044 aa8.88□□□□□ -0.99
TPM1-212ENST00000558347 ZNF587BE7ETH6 402 aa8.88□□□□□ -0.99
TPM1-212ENST00000558347 DHHO43323 396 aa8.88□□□□□ -0.99
TPM1-212ENST00000558347 NDUFS7O75251 213 aa8.88□□□□□ -0.99
TPM1-212ENST00000558347 CRYZL1O95825 349 aa8.88□□□□□ -0.99
TPM1-212ENST00000558347 LY6G6DO95868 133 aa8.88□□□□□ -0.99
TPM1-212ENST00000558347 HLA-DQA2P01906 255 aa8.88□□□□□ -0.99
TPM1-212ENST00000558347 ALDOBP05062 364 aa8.88□□□□□ -0.99
TPM1-212ENST00000558347 HEXAP06865 529 aa8.88□□□□□ -0.99
TPM1-212ENST00000558347 AKAIN1P0CW23 69 aa8.88□□□□□ -0.99
TPM1-212ENST00000558347 M6PRP20645 277 aa8.88□□□□□ -0.99
TPM1-212ENST00000558347 RAD52P43351 418 aa8.88□□□□□ -0.99
TPM1-212ENST00000558347 MAGEB1P43366 347 aa8.88□□□□□ -0.99
TPM1-212ENST00000558347 RIDAP52758 137 aaKnown RBP8.88□□□□□ -0.99
TPM1-212ENST00000558347 ARPC4P59998 168 aa8.88□□□□□ -0.99
TPM1-212ENST00000558347 RAB14P61106 215 aa8.88□□□□□ -0.99
TPM1-212ENST00000558347 SLC22A25Q6T423 547 aa8.88□□□□□ -0.99
TPM1-212ENST00000558347 SLC36A1Q7Z2H8 476 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms