RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 JAM3Q9BX67 310 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 LSM2Q9Y333 95 aaKnown RBP12.54□□□□□ -0.4
SPG11-210ENST00000558319 CRYAAP02489 173 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 DIO1P49895 249 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 MEOX1P50221 254 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 ZNF121P58317 390 aaPredicted RBP12.54□□□□□ -0.4
SPG11-210ENST00000558319 EGR3Q06889 387 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 CA13Q8N1Q1 262 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 AP5S1Q9NUS5 200 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 C4BP0C0L5 1744 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 HTR1DP28221 377 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 SULT1A1P50225 295 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 HLA-BQ31612 363 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 SLC35E4Q6ICL7 350 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 MUC20Q8N307 709 aaPredicted RBP12.54□□□□□ -0.4
SPG11-210ENST00000558319 SNX22Q96L94 193 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 TAAR6Q96RI8 345 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 ZDHHC5Q9C0B5 715 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 SLC25A22Q9H936 323 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 AKAP12Q02952 1782 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 MASP2O00187 686 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 SLCO2B1O94956 709 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 IL5P05113 134 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 SLC25A5P05141 298 aaKnown RBP12.54□□□□□ -0.4
SPG11-210ENST00000558319 TMEM52BQ4KMG9 183 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 SLC25A26Q70HW3 274 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 CCDC190Q86UF4 302 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 OR6S1Q8NH40 331 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 PACRGQ96M98 296 aaPredicted RBP12.54□□□□□ -0.4
SPG11-210ENST00000558319 RPP25Q9BUL9 199 aaKnown RBP12.54□□□□□ -0.4
SPG11-210ENST00000558319 GPR87Q9BY21 358 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 PRR13Q9NZ81 148 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 WASHC3Q9Y3C0 194 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 CLDN34H7C241 214 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 GEMIN2O14893 280 aaKnown RBP12.54□□□□□ -0.4
SPG11-210ENST00000558319 ABCD3P28288 659 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 VN1R1Q9GZP7 353 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 SLC35B3Q9H1N7 401 aa12.54□□□□□ -0.4
SPG11-210ENST00000558319 TNFRSF10CO14798 259 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 ADAM20O43506 726 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 KRASP01116 189 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 TMEM128Q5BJH2 165 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 OR2D3Q8NGH3 330 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 OR2A14Q96R47 310 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 PLA2G2FQ9BZM2 168 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 TXNIPQ9H3M7 391 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 DAPP1Q9UN19 280 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 C3orf80F5H4A9 247 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 PATE4P0C8F1 98 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 FAHP16930 419 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 GNG4P50150 75 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 FOXF1Q12946 379 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 PAM16Q9Y3D7 125 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 NAT2P11245 290 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 Q3ZCU0 254 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 FBXL6Q8N531 539 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 SMIM4Q8WVI0 70 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 NRTNQ99748 197 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 UBTD1Q9HAC8 227 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 F5H697 171 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 ZBTB25P24278 435 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 ACAA2P42765 397 aaKnown RBP12.53□□□□□ -0.4
SPG11-210ENST00000558319 ASIC5Q9NY37 505 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 HSF4Q9ULV5 492 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 TIMM10BQ9Y5J6 103 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 C5P01031 1676 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 METTL12A8MUP2 240 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 ZNF195O14628 629 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 LYZL6O75951 148 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 APOBEC1P41238 236 aaKnown RBP12.53□□□□□ -0.4
SPG11-210ENST00000558319 TCL1AP56279 114 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 DPPA3Q6W0C5 159 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 OR2T6Q8NHC8 308 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 RFESDQ8TAC1 157 aa12.53□□□□□ -0.4
SPG11-210ENST00000558319 BCL2L2Q92843 193 aaPredicted RBP12.53□□□□□ -0.4
SPG11-210ENST00000558319 SHROOM3Q8TF72 1996 aa12.52□□□□□ -0.4
SPG11-210ENST00000558319 CACNA1SQ13698 1873 aa12.52□□□□□ -0.4
SPG11-210ENST00000558319 NPY1RP25929 384 aa12.52□□□□□ -0.4
SPG11-210ENST00000558319 SUCLG1P53597 346 aaKnown RBP12.52□□□□□ -0.4
SPG11-210ENST00000558319 CIB3Q96Q77 187 aaPredicted RBP12.52□□□□□ -0.4
SPG11-210ENST00000558319 MMACHCQ9Y4U1 282 aa12.52□□□□□ -0.4
SPG11-210ENST00000558319 BTNL3Q6UXE8 466 aa12.52□□□□□ -0.4
SPG11-210ENST00000558319 SFTPA1Q8IWL2 248 aa12.52□□□□□ -0.4
SPG11-210ENST00000558319 OR5C1Q8NGR4 320 aa12.52□□□□□ -0.4
SPG11-210ENST00000558319 SRD5A3Q9H8P0 318 aa12.52□□□□□ -0.4
SPG11-210ENST00000558319 FOXJ3Q9UPW0 622 aa12.52□□□□□ -0.4
SPG11-210ENST00000558319 HS3ST3A1Q9Y663 406 aa12.52□□□□□ -0.4
SPG11-210ENST00000558319 LRRC3CA6NJW4 275 aa12.52□□□□□ -0.41
SPG11-210ENST00000558319 M0R1X1 148 aa12.52□□□□□ -0.41
SPG11-210ENST00000558319 NTN1O95631 604 aa12.52□□□□□ -0.41
SPG11-210ENST00000558319 G6PCP35575 357 aa12.52□□□□□ -0.41
SPG11-210ENST00000558319 RAB32Q13637 225 aa12.52□□□□□ -0.41
SPG11-210ENST00000558319 ELAVL1Q15717 326 aaKnown RBP12.52□□□□□ -0.41
SPG11-210ENST00000558319 DND1Q8IYX4 353 aaKnown RBP12.52□□□□□ -0.41
SPG11-210ENST00000558319 KISS1RQ969F8 398 aaPredicted RBP12.52□□□□□ -0.41
SPG11-210ENST00000558319 PRSS37A4D1T9 235 aa12.52□□□□□ -0.41
SPG11-210ENST00000558319 ETHE1O95571 254 aa12.52□□□□□ -0.41
SPG11-210ENST00000558319 SELEP16581 610 aa12.52□□□□□ -0.41
SPG11-210ENST00000558319 RGS7BPQ6MZT1 257 aaPredicted RBP12.52□□□□□ -0.41
SPG11-210ENST00000558319 NUBPLQ8TB37 319 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms