RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 LOC110117498-PIK3R3F6TDL0 507 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 DLGAP1O14490 977 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 MITFO75030 526 aaPredicted RBP8.35□□□□□ -1.07
USP3-207ENST00000558218 NOS1APO75052 506 aaPredicted RBP8.35□□□□□ -1.07
USP3-207ENST00000558218 TTRP02766 147 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 EPHA2P29317 976 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 HTR1FP30939 366 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 CAV3P56539 151 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 CXCR4P61073 352 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 IL13RA1P78552 427 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 SLC25A30Q5SVS4 291 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 TMEM42Q69YG0 159 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 STUMQ69YW2 141 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 KCTD8Q6ZWB6 473 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 ASRGL1Q7L266 308 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 AMIGO2Q86SJ2 522 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 EGFL6Q8IUX8 553 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 SLC35F2Q8IXU6 374 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 ANGPTL6Q8NI99 470 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 OR51E1Q8TCB6 317 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 HPSE2Q8WWQ2 592 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 LRTOMTQ8WZ04 291 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 RPL3LQ92901 407 aaKnown RBP8.35□□□□□ -1.07
USP3-207ENST00000558218 TBX15Q96SF7 602 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 CCL13Q99616 98 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 CIB1Q99828 191 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 GABARAPL3Q9BY60 117 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 PPP1R3EQ9H7J1 279 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 GPR84Q9NQS5 396 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 ACOXLQ9NUZ1 547 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 DNAJB11Q9UBS4 358 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 IKZF2Q9UKS7 526 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 COPS3Q9UNS2 423 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 CAB39Q9Y376 341 aaPredicted RBP8.35□□□□□ -1.07
USP3-207ENST00000558218 IGHV3OR15-7A0A075B7D8 119 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 IGHV1-69DA0A0B4J2H0 117 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 NKX6-3A6NJ46 265 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 OR2AT4A6NND4 320 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 ZNF732B4DXR9 585 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 PSMD9O00233 223 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 SIGLEC5O15389 551 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 FCN3O75636 299 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 NRASP01111 189 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 IGHV1-69P01742 117 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 KRT8P05787 483 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 MRPL3P09001 348 aaKnown RBP8.34□□□□□ -1.07
USP3-207ENST00000558218 AMY2BP19961 511 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 GLRA1P23415 457 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 GPM6AP51674 278 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 ARF6P62330 175 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 HOXA4Q00056 320 aaPredicted RBP8.34□□□□□ -1.07
USP3-207ENST00000558218 DEFB112Q30KQ8 113 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 CLVS2Q5SYC1 327 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 ZNF684Q5T5D7 378 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 ZFP1Q6P2D0 407 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 PLEKHG7Q6ZR37 379 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 MOB3CQ70IA8 216 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 KCTD20Q7Z5Y7 419 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 ZNF573Q86YE8 665 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 TBC1D15Q8TC07 691 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 ST8SIA4Q92187 359 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 AQP3Q92482 292 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 TMIGD2Q96BF3 282 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 C10orf35Q96D05 121 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 IL4I1Q96RQ9 567 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 MYCBPQ99417 103 aaPredicted RBP8.34□□□□□ -1.07
USP3-207ENST00000558218 APOL4Q9BPW4 351 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 DCTN5Q9BTE1 182 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 UNKLQ9H9P5 680 aaKnown RBP8.34□□□□□ -1.07
USP3-207ENST00000558218 LIN7BQ9HAP6 207 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 NLKQ9UBE8 527 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 OR52A1Q9UKL2 312 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.34□□□□□ -1.07
USP3-207ENST00000558218 PIGLQ9Y2B2 252 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 MMP24Q9Y5R2 645 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 V9GYS6 101 aa8.34□□□□□ -1.07
USP3-207ENST00000558218 IGHV3OR16-10A0A075B7F0 116 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 TRBV23-1A0A0A0MS06 115 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 A0A1B0GTI1 187 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 METTL15A6NJ78 407 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 SNTNA6NMZ2 147 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 PRR32B1ATL7 298 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 M0R1W7 72 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 AKR7A2O43488 359 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 SFTPBP07988 381 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 CCL1P22362 96 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 ATP6V1E1P36543 226 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 CDC42P60953 191 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 BLMHQ13867 455 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 BCL2L15Q5TBC7 163 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 MEDAGQ5VYS4 303 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 BRD3OSQ6XYD6 125 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 COMMD2Q86X83 199 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 OR5T2Q8NGG2 359 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 OR14K1Q8NGZ2 314 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 SSMEM1Q8WWF3 244 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 SDSLQ96GA7 329 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 HRASLS5Q96KN8 279 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 KRTAP4-8Q9BYQ9 185 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 FGF23Q9GZV9 251 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms