RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 ARL2BPQ9Y2Y0 163 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 LRP12Q9Y561 859 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 A0A0U1RQV5 110 aa12.96□□□□□ -0.33
SCFD1-224ENST00000557713 ACOD1A6NK06 481 aa12.96□□□□□ -0.33
SCFD1-224ENST00000557713 PRODHO43272 600 aa12.96□□□□□ -0.33
SCFD1-224ENST00000557713 ANGPTL7O43827 346 aa12.96□□□□□ -0.33
SCFD1-224ENST00000557713 ALOX5APP20292 161 aa12.96□□□□□ -0.33
SCFD1-224ENST00000557713 LRRC75BQ2VPJ9 315 aa12.96□□□□□ -0.33
SCFD1-224ENST00000557713 CEP78Q5JTW2 689 aa12.96□□□□□ -0.33
SCFD1-224ENST00000557713 MKXQ8IYA7 352 aa12.96□□□□□ -0.33
SCFD1-224ENST00000557713 FAM185AQ8N0U4 392 aa12.96□□□□□ -0.33
SCFD1-224ENST00000557713 ARHGAP24Q8N264 748 aa12.96□□□□□ -0.33
SCFD1-224ENST00000557713 OR5A2Q8NGI9 324 aa12.96□□□□□ -0.33
SCFD1-224ENST00000557713 OR4C13Q8NGP0 309 aa12.96□□□□□ -0.33
SCFD1-224ENST00000557713 PIFOQ8TCI5 191 aa12.96□□□□□ -0.33
SCFD1-224ENST00000557713 AQP3Q92482 292 aa12.96□□□□□ -0.33
SCFD1-224ENST00000557713 ITFG2Q969R8 447 aa12.96□□□□□ -0.33
SCFD1-224ENST00000557713 RANBP3Q9H6Z4 567 aaPredicted RBP12.96□□□□□ -0.33
SCFD1-224ENST00000557713 C19orf12Q9NSK7 152 aa12.96□□□□□ -0.33
SCFD1-224ENST00000557713 RASL12Q9NYN1 266 aa12.96□□□□□ -0.33
SCFD1-224ENST00000557713 ARRDC5A6NEK1 342 aa12.95□□□□□ -0.34
SCFD1-224ENST00000557713 B2RBV5 119 aa12.95□□□□□ -0.34
SCFD1-224ENST00000557713 MTRF1O75570 445 aaKnown RBP12.95□□□□□ -0.34
SCFD1-224ENST00000557713 DCTN3O75935 186 aa12.95□□□□□ -0.34
SCFD1-224ENST00000557713 PAX6P26367 422 aa12.95□□□□□ -0.34
SCFD1-224ENST00000557713 MNAT1P51948 309 aa12.95□□□□□ -0.34
SCFD1-224ENST00000557713 HCCSP53701 268 aa12.95□□□□□ -0.34
SCFD1-224ENST00000557713 DMRTC1Q5HYR2 192 aa12.95□□□□□ -0.34
SCFD1-224ENST00000557713 SLC35D3Q5M8T2 416 aa12.95□□□□□ -0.34
SCFD1-224ENST00000557713 TMEM200BQ69YZ2 307 aa12.95□□□□□ -0.34
SCFD1-224ENST00000557713 TRPM8Q7Z2W7 1104 aa12.95□□□□□ -0.34
SCFD1-224ENST00000557713 KRT77Q7Z794 578 aa12.95□□□□□ -0.34
SCFD1-224ENST00000557713 TMEM179BQ7Z7N9 219 aa12.95□□□□□ -0.34
SCFD1-224ENST00000557713 CPOQ8IVL8 374 aa12.95□□□□□ -0.34
SCFD1-224ENST00000557713 CD177Q8N6Q3 437 aa12.95□□□□□ -0.34
SCFD1-224ENST00000557713 KLHDC1Q8N7A1 406 aa12.95□□□□□ -0.34
SCFD1-224ENST00000557713 C11orf44Q8N8P7 122 aa12.95□□□□□ -0.34
SCFD1-224ENST00000557713 OR5K1Q8NHB7 308 aa12.95□□□□□ -0.34
SCFD1-224ENST00000557713 HEXA-AS1Q9H8Q6 139 aa12.95□□□□□ -0.34
SCFD1-224ENST00000557713 FAM206AQ9NX38 181 aa12.95□□□□□ -0.34
SCFD1-224ENST00000557713 OR5B21A6NL26 309 aa12.94□□□□□ -0.34
SCFD1-224ENST00000557713 IGLV3-1P01715 115 aa12.94□□□□□ -0.34
SCFD1-224ENST00000557713 HMGN1P05114 100 aa12.94□□□□□ -0.34
SCFD1-224ENST00000557713 RAP2AP10114 183 aa12.94□□□□□ -0.34
SCFD1-224ENST00000557713 ATP6V1B1P15313 513 aa12.94□□□□□ -0.34
SCFD1-224ENST00000557713 SLC2A5P22732 501 aa12.94□□□□□ -0.34
SCFD1-224ENST00000557713 CDK5Q00535 292 aa12.94□□□□□ -0.34
SCFD1-224ENST00000557713 DEGS2Q6QHC5 323 aa12.94□□□□□ -0.34
SCFD1-224ENST00000557713 ACP7Q6ZNF0 438 aa12.94□□□□□ -0.34
SCFD1-224ENST00000557713 MOB3CQ70IA8 216 aa12.94□□□□□ -0.34
SCFD1-224ENST00000557713 THAP5Q7Z6K1 395 aa12.94□□□□□ -0.34
SCFD1-224ENST00000557713 BBS1Q8NFJ9 593 aa12.94□□□□□ -0.34
SCFD1-224ENST00000557713 OR2T6Q8NHC8 308 aa12.94□□□□□ -0.34
SCFD1-224ENST00000557713 FAM81AQ8TBF8 368 aa12.94□□□□□ -0.34
SCFD1-224ENST00000557713 RAB18Q9NP72 206 aa12.94□□□□□ -0.34
SCFD1-224ENST00000557713 LAMP5Q9UJQ1 280 aa12.94□□□□□ -0.34
SCFD1-224ENST00000557713 TMEM269A0A1B0GVZ9 245 aa12.93□□□□□ -0.34
SCFD1-224ENST00000557713 RFPL4AA6NLU0 287 aa12.93□□□□□ -0.34
SCFD1-224ENST00000557713 RFPL4AL1F8VTS6 287 aa12.93□□□□□ -0.34
SCFD1-224ENST00000557713 ATP8B1O43520 1251 aa12.93□□□□□ -0.34
SCFD1-224ENST00000557713 CHST1O43916 411 aa12.93□□□□□ -0.34
SCFD1-224ENST00000557713 CST1P01037 141 aa12.93□□□□□ -0.34
SCFD1-224ENST00000557713 PRDX2P32119 198 aa12.93□□□□□ -0.34
SCFD1-224ENST00000557713 CAPZA1P52907 286 aa12.93□□□□□ -0.34
SCFD1-224ENST00000557713 ERVFRD-1P60508 538 aa12.93□□□□□ -0.34
SCFD1-224ENST00000557713 RPL31P62899 125 aaKnown RBP12.93□□□□□ -0.34
SCFD1-224ENST00000557713 RIPPLY1Q0D2K3 151 aa12.93□□□□□ -0.34
SCFD1-224ENST00000557713 ZBTB37Q5TC79 503 aa12.93□□□□□ -0.34
SCFD1-224ENST00000557713 HAGHLQ6PII5 290 aaPredicted RBP12.93□□□□□ -0.34
SCFD1-224ENST00000557713 LIAT1Q6ZQX7 453 aa12.93□□□□□ -0.34
SCFD1-224ENST00000557713 POC1AQ8NBT0 407 aa12.93□□□□□ -0.34
SCFD1-224ENST00000557713 CLPTM1LQ96KA5 538 aa12.93□□□□□ -0.34
SCFD1-224ENST00000557713 ZNF488Q96MN9 340 aa12.93□□□□□ -0.34
SCFD1-224ENST00000557713 CHID1Q9BWS9 393 aa12.93□□□□□ -0.34
SCFD1-224ENST00000557713 YIPF3Q9GZM5 350 aa12.93□□□□□ -0.34
SCFD1-224ENST00000557713 PBOV1Q9GZY1 135 aa12.93□□□□□ -0.34
SCFD1-224ENST00000557713 A0A1W2PPH5 198 aa12.92□□□□□ -0.34
SCFD1-224ENST00000557713 FAM90A8PA6NJQ4 464 aa12.92□□□□□ -0.34
SCFD1-224ENST00000557713 NOS1APO75052 506 aaPredicted RBP12.92□□□□□ -0.34
SCFD1-224ENST00000557713 PRB2P02812 416 aaPredicted RBP12.92□□□□□ -0.34
SCFD1-224ENST00000557713 OSMP13725 252 aa12.92□□□□□ -0.34
SCFD1-224ENST00000557713 KCTD18Q6PI47 426 aaPredicted RBP12.92□□□□□ -0.34
SCFD1-224ENST00000557713 Q6ZPA2 131 aa12.92□□□□□ -0.34
SCFD1-224ENST00000557713 ZNF561Q8N587 486 aa12.92□□□□□ -0.34
SCFD1-224ENST00000557713 DTX3Q8N9I9 347 aa12.92□□□□□ -0.34
SCFD1-224ENST00000557713 OR51E1Q8TCB6 317 aa12.92□□□□□ -0.34
SCFD1-224ENST00000557713 PPP1R14AQ96A00 147 aa12.92□□□□□ -0.34
SCFD1-224ENST00000557713 NSL1Q96IY1 281 aa12.92□□□□□ -0.34
SCFD1-224ENST00000557713 TEAD3Q99594 435 aa12.92□□□□□ -0.34
SCFD1-224ENST00000557713 NPFFR1Q9GZQ6 430 aa12.92□□□□□ -0.34
SCFD1-224ENST00000557713 GPR84Q9NQS5 396 aa12.92□□□□□ -0.34
SCFD1-224ENST00000557713 PIGLQ9Y2B2 252 aa12.92□□□□□ -0.34
SCFD1-224ENST00000557713 VGLL3A8MV65 326 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 PRR32B1ATL7 298 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 PSMD9O00233 223 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 SLC1A7O00341 560 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 GSC2O15499 205 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 SYNGR1O43759 233 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 PGA5P0DJD9 388 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 VSIG10L2P0DP72 767 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms