RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 A0A1B0GX78 115 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 A0A1W2PPH5 198 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 ETV2O00321 342 aaPredicted RBP10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 EFNA2O43921 213 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 DANCRP0C864 163 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 RAB5AP20339 215 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 ANOS1P23352 680 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 ACKR3P25106 362 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 CAMLGP49069 296 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 UCP2P55851 309 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 KCNMB1Q16558 191 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 DEFB133Q30KQ1 61 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 SHISA6Q6ZSJ9 500 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 THAP3Q8WTV1 239 aaPredicted RBP10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 ERGIC1Q969X5 290 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 MRGPRX4Q96LA9 322 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 PPP4R1LQ9P1A2 415 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 FER1L5A0AVI2 2057 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 A0A1W2PPE3 182 aa10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 TRAF3IP2O43734 574 aaPredicted RBP10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 DMRTC1Q5HYR2 192 aa10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 OR6X1Q8NH79 312 aa10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 ISOC2Q96AB3 205 aa10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 IP6K3Q96PC2 410 aa10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 ELL3Q9HB65 397 aaPredicted RBP10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 SLC2A4RGQ9NR83 387 aa10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 KLRF1Q9NZS2 232 aa10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 PADI1Q9ULC6 663 aa10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 MYO7BQ6PIF6 2116 aa10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 XIRP2A4UGR9 3374 aa10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 IGKV1D-8A0A087WSZ0 117 aa10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 EPOPA6NHQ4 379 aa10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 FCGR2AP12318 317 aa10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 POLR2GP62487 172 aaKnown RBP eCLIP10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 C14orf28Q4W4Y0 310 aa10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 SLC16A14Q7RTX9 510 aa10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 TCTEX1D2Q8WW35 142 aa10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 LIN37Q96GY3 246 aaPredicted RBP10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 OR51M1Q9H341 326 aa10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 KCNIP3Q9Y2W7 256 aa10.37□□□□□ -0.75
VIPAS39-211ENST00000557658 DHRS7CA6NNS2 312 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 UMAD1C9J7I0 102 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 EIF1BO60739 113 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 QDPRP09417 244 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 FOLR1P15328 257 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 S100PP25815 95 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 MSX1P28360 303 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 EIF1P41567 113 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 RAB5CP51148 216 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 SUCLG1P53597 346 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 RHEBQ15382 184 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 SLC25A53Q5H9E4 307 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 FAM209BQ5JX69 171 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 RPUSD3Q6P087 351 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 FBXO46Q6PJ61 603 aaPredicted RBP10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 CRIP3Q6Q6R5 217 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 SLC38A9Q8NBW4 561 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 OR1J1Q8NGS3 322 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 FBXO17Q96EF6 278 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 GINS3Q9BRX5 216 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 C20orf24Q9BUV8 137 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 PBDC1Q9BVG4 233 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 SCRT1Q9BWW7 348 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 C19orf12Q9NSK7 152 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 PLEKHJ1Q9NW61 149 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 CLEC1BQ9P126 229 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 MCTS1Q9ULC4 181 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 STRAPQ9Y3F4 350 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 TRAV20A0A0B4J274 112 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 hCG_1809904A0A1W2PP81 198 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 A0A1W2PR64 198 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 A0A1W2PRV1 198 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 ZNF726A6NNF4 738 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 GPR137BO60478 399 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 IGHV2-5P01817 119 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 MBPP02686 304 aaPredicted RBP10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 OPN1LWP04000 364 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 DAOP14920 347 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 P2RY1P47900 373 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 ZNF133P52736 654 aaPredicted RBP10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 OR1D5P58170 312 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 SMAD4Q13485 552 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 TGIF1Q15583 401 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 PLPPR5Q32ZL2 321 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 GPR157Q5UAW9 335 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 C6orf201Q7Z4U5 140 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 CARFQ8N187 725 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 D2HGDHQ8N465 521 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 APCDD1LQ8NCL9 501 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 POC1BQ8TC44 478 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 PP6455Q8WZ26 134 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 MALSU1Q96EH3 234 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 OXGR1Q96P68 337 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 LMAN1LQ9HAT1 526 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 KCNJ16Q9NPI9 418 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 DECR2Q9NUI1 292 aa10.36□□□□□ -0.75
VIPAS39-211ENST00000557658 PRH1P02810 166 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 OR5H8P0DN80 308 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 ZNF43P17038 809 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 GABRR1P24046 479 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms