RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 OR51I2Q9H344 312 aa13.23□□□□□ -0.29
TUBB3-214ENST00000557490 ERVK13-1Q9NX77 482 aa13.23□□□□□ -0.29
TUBB3-214ENST00000557490 DNAJB11Q9UBS4 358 aa13.23□□□□□ -0.29
TUBB3-214ENST00000557490 METRNQ9UJH8 293 aa13.23□□□□□ -0.29
TUBB3-214ENST00000557490 INSIG2Q9Y5U4 225 aa13.23□□□□□ -0.29
TUBB3-214ENST00000557490 HSPE1-MOB4S4R3N1 261 aa13.23□□□□□ -0.29
TUBB3-214ENST00000557490 LOC105371242A0A075B767 164 aa13.22□□□□□ -0.29
TUBB3-214ENST00000557490 ANKRD61A6NGH8 418 aa13.22□□□□□ -0.29
TUBB3-214ENST00000557490 A6NIN4 97 aa13.22□□□□□ -0.29
TUBB3-214ENST00000557490 H0YAE9 185 aa13.22□□□□□ -0.29
TUBB3-214ENST00000557490 SPRY1O43609 319 aaPredicted RBP13.22□□□□□ -0.29
TUBB3-214ENST00000557490 CCR9P51686 369 aa13.22□□□□□ -0.29
TUBB3-214ENST00000557490 MRPL28Q13084 256 aaKnown RBP13.22□□□□□ -0.29
TUBB3-214ENST00000557490 SMN1Q16637 294 aaKnown RBP13.22□□□□□ -0.29
TUBB3-214ENST00000557490 C1QL2Q7Z5L3 287 aa13.22□□□□□ -0.29
TUBB3-214ENST00000557490 ZNF573Q86YE8 665 aa13.22□□□□□ -0.29
TUBB3-214ENST00000557490 RDH10Q8IZV5 341 aa13.22□□□□□ -0.29
TUBB3-214ENST00000557490 NANPQ8TBE9 248 aa13.22□□□□□ -0.29
TUBB3-214ENST00000557490 RNF166Q96A37 237 aaPredicted RBP13.22□□□□□ -0.29
TUBB3-214ENST00000557490 C12orf43Q96C57 262 aaKnown RBP13.22□□□□□ -0.29
TUBB3-214ENST00000557490 PELI1Q96FA3 418 aa13.22□□□□□ -0.29
TUBB3-214ENST00000557490 TECTBQ96PL2 329 aa13.22□□□□□ -0.29
TUBB3-214ENST00000557490 FGF20Q9NP95 211 aaPredicted RBP13.22□□□□□ -0.29
TUBB3-214ENST00000557490 FRRS1LQ9P0K9 344 aa13.22□□□□□ -0.29
TUBB3-214ENST00000557490 NKX1-2Q9UD57 310 aaPredicted RBP13.22□□□□□ -0.29
TUBB3-214ENST00000557490 SLC7A11Q9UPY5 501 aa13.22□□□□□ -0.29
TUBB3-214ENST00000557490 TENM1Q9UKZ4 2725 aa13.22□□□□□ -0.29
TUBB3-214ENST00000557490 TNFRSF13BO14836 293 aaPredicted RBP13.21□□□□□ -0.29
TUBB3-214ENST00000557490 AKR7A2O43488 359 aa13.21□□□□□ -0.29
TUBB3-214ENST00000557490 GATBO75879 557 aaKnown RBP13.21□□□□□ -0.29
TUBB3-214ENST00000557490 SERPINA3P01011 423 aa13.21□□□□□ -0.29
TUBB3-214ENST00000557490 AVPP01185 164 aa13.21□□□□□ -0.29
TUBB3-214ENST00000557490 GBX2P52951 348 aaPredicted RBP13.21□□□□□ -0.29
TUBB3-214ENST00000557490 ALKBH1Q13686 389 aaKnown RBP13.21□□□□□ -0.29
TUBB3-214ENST00000557490 CD276Q5ZPR3 534 aa13.21□□□□□ -0.29
TUBB3-214ENST00000557490 HAGHLQ6PII5 290 aaPredicted RBP13.21□□□□□ -0.29
TUBB3-214ENST00000557490 ZNF841Q6ZN19 808 aa13.21□□□□□ -0.29
TUBB3-214ENST00000557490 C1orf229Q6ZS94 237 aaPredicted RBP13.21□□□□□ -0.29
TUBB3-214ENST00000557490 SLC36A1Q7Z2H8 476 aa13.21□□□□□ -0.29
TUBB3-214ENST00000557490 C8orf59Q8N0T1 100 aaPredicted RBP13.21□□□□□ -0.29
TUBB3-214ENST00000557490 RAB40AQ8WXH6 277 aa13.21□□□□□ -0.29
TUBB3-214ENST00000557490 C10orf35Q96D05 121 aa13.21□□□□□ -0.29
TUBB3-214ENST00000557490 CTSZQ9UBR2 303 aa13.21□□□□□ -0.29
TUBB3-214ENST00000557490 OPN4Q9UHM6 478 aa13.21□□□□□ -0.29
TUBB3-214ENST00000557490 AUP1Q9Y679 476 aa13.21□□□□□ -0.29
TUBB3-214ENST00000557490 IGHV2-70DA0A0C4DH43 119 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 PQLC2LA1A4F0 135 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.2□□□□□ -0.3
TUBB3-214ENST00000557490 TMPRSS2O15393 492 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 RHBDL1O75783 438 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 ISG15P05161 165 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 RPSAP08865 295 aaKnown RBP13.2□□□□□ -0.3
TUBB3-214ENST00000557490 ADRA2CP18825 462 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 GLRA1P23415 457 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 DCKP27707 260 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 HAAOP46952 286 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 NANOS3P60323 173 aaKnown RBP13.2□□□□□ -0.3
TUBB3-214ENST00000557490 ZNF676Q8N7Q3 588 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 HAVCR2Q8TDQ0 301 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 AQP3Q92482 292 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 TMIGD2Q96BF3 282 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 SEH1LQ96EE3 360 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 CCL13Q99616 98 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 NUDT16L1Q9BRJ7 211 aaKnown RBP13.2□□□□□ -0.3
TUBB3-214ENST00000557490 JAM3Q9BX67 310 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 WDR13Q9H1Z4 485 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 ISG20L2Q9H9L3 353 aaKnown RBP13.2□□□□□ -0.3
TUBB3-214ENST00000557490 SNTG1Q9NSN8 517 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 KAAG1Q9UBP8 84 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 HHLA2Q9UM44 414 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 POLDIP2Q9Y2S7 368 aa13.2□□□□□ -0.3
TUBB3-214ENST00000557490 FAM230AA0A1W2PPH8 454 aa13.19□□□□□ -0.3
TUBB3-214ENST00000557490 NKX6-3A6NJ46 265 aa13.19□□□□□ -0.3
TUBB3-214ENST00000557490 H0YHG0 523 aa13.19□□□□□ -0.3
TUBB3-214ENST00000557490 J3QT63 122 aa13.19□□□□□ -0.3
TUBB3-214ENST00000557490 ENSAO43768 121 aaKnown RBP13.19□□□□□ -0.3
TUBB3-214ENST00000557490 CCDC159P0C7I6 412 aa13.19□□□□□ -0.3
TUBB3-214ENST00000557490 ZNF20P17024 532 aa13.19□□□□□ -0.3
TUBB3-214ENST00000557490 MYL12AP19105 171 aa13.19□□□□□ -0.3
TUBB3-214ENST00000557490 SRSF2Q01130 221 aaKnown RBP13.19□□□□□ -0.3
TUBB3-214ENST00000557490 PAX2Q02962 417 aa13.19□□□□□ -0.3
TUBB3-214ENST00000557490 PAX8Q06710 450 aa13.19□□□□□ -0.3
TUBB3-214ENST00000557490 MED21Q13503 144 aa13.19□□□□□ -0.3
TUBB3-214ENST00000557490 TMPRSS11AQ6ZMR5 421 aa13.19□□□□□ -0.3
TUBB3-214ENST00000557490 OR5T2Q8NGG2 359 aa13.19□□□□□ -0.3
TUBB3-214ENST00000557490 TRMT10AQ8TBZ6 339 aaKnown RBP13.19□□□□□ -0.3
TUBB3-214ENST00000557490 PP6455Q8WZ26 134 aa13.19□□□□□ -0.3
TUBB3-214ENST00000557490 ZNF649Q9BS31 505 aa13.19□□□□□ -0.3
TUBB3-214ENST00000557490 CHST5Q9GZS9 411 aa13.19□□□□□ -0.3
TUBB3-214ENST00000557490 RASSF4Q9H2L5 321 aa13.19□□□□□ -0.3
TUBB3-214ENST00000557490 OCEL1Q9H607 264 aa13.19□□□□□ -0.3
TUBB3-214ENST00000557490 CHCHD3Q9NX63 227 aaKnown RBP13.19□□□□□ -0.3
TUBB3-214ENST00000557490 EXOSC1Q9Y3B2 195 aaKnown RBP13.19□□□□□ -0.3
TUBB3-214ENST00000557490 KIR2DS1A0A191URI9 304 aa13.18□□□□□ -0.3
TUBB3-214ENST00000557490 OR4C45A6NMZ5 311 aa13.18□□□□□ -0.3
TUBB3-214ENST00000557490 DVL1O14640 695 aa13.18□□□□□ -0.3
TUBB3-214ENST00000557490 NDUFB3O43676 98 aa13.18□□□□□ -0.3
TUBB3-214ENST00000557490 GNAO1P09471 354 aa13.18□□□□□ -0.3
TUBB3-214ENST00000557490 LIMS3P0CW19 117 aa13.18□□□□□ -0.3
TUBB3-214ENST00000557490 LIMS4P0CW20 117 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms