RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 RIIAD1A6NNX1 92 aa11.41□□□□□ -0.58
SLIRP-210ENST00000557431 B2RBV5 119 aa11.41□□□□□ -0.58
SLIRP-210ENST00000557431 FBXO24O75426 580 aa11.41□□□□□ -0.58
SLIRP-210ENST00000557431 ZNF3P17036 446 aa11.41□□□□□ -0.58
SLIRP-210ENST00000557431 HMGA2P52926 109 aa11.41□□□□□ -0.58
SLIRP-210ENST00000557431 HCCSP53701 268 aa11.41□□□□□ -0.58
SLIRP-210ENST00000557431 ZNF273Q14593 569 aa11.41□□□□□ -0.58
SLIRP-210ENST00000557431 SPATS1Q496A3 300 aa11.41□□□□□ -0.58
SLIRP-210ENST00000557431 CCBE1Q6UXH8 406 aaPredicted RBP11.41□□□□□ -0.58
SLIRP-210ENST00000557431 Q6ZS46 218 aa11.41□□□□□ -0.58
SLIRP-210ENST00000557431 CD177Q8N6Q3 437 aa11.41□□□□□ -0.58
SLIRP-210ENST00000557431 SGCDQ92629 289 aa11.41□□□□□ -0.58
SLIRP-210ENST00000557431 PHF21AQ96BD5 680 aa11.41□□□□□ -0.58
SLIRP-210ENST00000557431 R3HDM4Q96D70 268 aa11.41□□□□□ -0.58
SLIRP-210ENST00000557431 DMRTB1Q96MA1 342 aa11.41□□□□□ -0.58
SLIRP-210ENST00000557431 CITED2Q99967 270 aaPredicted RBP11.41□□□□□ -0.58
SLIRP-210ENST00000557431 CMC2Q9NRP2 79 aa11.41□□□□□ -0.58
SLIRP-210ENST00000557431 SERTAD4Q9NUC0 356 aa11.41□□□□□ -0.58
SLIRP-210ENST00000557431 ADARB2-AS1A8MUL3 147 aa11.4□□□□□ -0.58
SLIRP-210ENST00000557431 KRT36O76013 467 aa11.4□□□□□ -0.58
SLIRP-210ENST00000557431 GLCEO94923 617 aa11.4□□□□□ -0.58
SLIRP-210ENST00000557431 CST4P01036 141 aa11.4□□□□□ -0.58
SLIRP-210ENST00000557431 IFNGP01579 166 aa11.4□□□□□ -0.58
SLIRP-210ENST00000557431 LYNP07948 512 aa11.4□□□□□ -0.58
SLIRP-210ENST00000557431 T-ENOLP0DO92 83 aa11.4□□□□□ -0.58
SLIRP-210ENST00000557431 PIPP12273 146 aaPredicted RBP11.4□□□□□ -0.58
SLIRP-210ENST00000557431 CFL1P23528 166 aaKnown RBP11.4□□□□□ -0.58
SLIRP-210ENST00000557431 HAGHLQ6PII5 290 aaPredicted RBP11.4□□□□□ -0.58
SLIRP-210ENST00000557431 MOB3CQ70IA8 216 aa11.4□□□□□ -0.58
SLIRP-210ENST00000557431 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.4□□□□□ -0.58
SLIRP-210ENST00000557431 C11orf42Q8N5U0 333 aa11.4□□□□□ -0.58
SLIRP-210ENST00000557431 PPP1R14AQ96A00 147 aa11.4□□□□□ -0.58
SLIRP-210ENST00000557431 RANBP3Q9H6Z4 567 aaPredicted RBP11.4□□□□□ -0.58
SLIRP-210ENST00000557431 BAIAP2Q9UQB8 552 aa11.4□□□□□ -0.58
SLIRP-210ENST00000557431 SAMHD1Q9Y3Z3 626 aaKnown RBP11.4□□□□□ -0.58
SLIRP-210ENST00000557431 LRP12Q9Y561 859 aa11.4□□□□□ -0.58
SLIRP-210ENST00000557431 A0A1W2PRX2 142 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 TCRBV5S2A0A599 114 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 RFPL4AA6NLU0 287 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 RFPL4AL1F8VTS6 287 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 SYNGR1O43759 233 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 APOC1P02654 83 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 CALB2P22676 271 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 LOXL3P58215 753 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 MICAQ29983 383 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 FAM76BQ5HYJ3 339 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 LDLRAD2Q5SZI1 272 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 PLBD1Q6P4A8 553 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 SHFQ7M4L6 423 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 THAP5Q7Z6K1 395 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 FTMTQ8N4E7 242 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 BBS1Q8NFJ9 593 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 OR5D13Q8NGL4 314 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 OTOSQ8NHW6 89 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 FAM81AQ8TBF8 368 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 TEX47Q8TBZ9 253 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 BCAS4Q8TDM0 211 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 NPFFR1Q9GZQ6 430 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 FAM234AQ9H0X4 552 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 OR51I2Q9H344 312 aa11.39□□□□□ -0.59
SLIRP-210ENST00000557431 TRBV23-1A0A0A0MS06 115 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 PRR32B1ATL7 298 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 H3BN98 237 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 MPIG6BO95866 241 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 IGLL1P15814 213 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 FAHP16930 419 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 MAGEA2P43356 314 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 PSMA6P60900 246 aaKnown RBP11.38□□□□□ -0.59
SLIRP-210ENST00000557431 RPL31P62899 125 aaKnown RBP11.38□□□□□ -0.59
SLIRP-210ENST00000557431 FOXB2Q5VYV0 432 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 PLCXD3Q63HM9 321 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 TMEM200BQ69YZ2 307 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 C11orf87Q6NUJ2 197 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 ACP7Q6ZNF0 438 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 COMMD2Q86X83 199 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 ARHGAP24Q8N264 748 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 OR10G2Q8NGC3 310 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 OR2T27Q8NH04 317 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 AQP3Q92482 292 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 HIST1H2AAQ96QV6 131 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 DGCR6LQ9BY27 220 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 RGCCQ9H4X1 137 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 NIPAL2Q9H841 368 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 NECAP2Q9NVZ3 263 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 OR14J1Q9UGF5 321 aa11.38□□□□□ -0.59
SLIRP-210ENST00000557431 DNAH9Q9NYC9 4486 aa11.37□□□□□ -0.59
SLIRP-210ENST00000557431 MRPL3P09001 348 aaKnown RBP11.37□□□□□ -0.59
SLIRP-210ENST00000557431 BLVRAP53004 296 aa11.37□□□□□ -0.59
SLIRP-210ENST00000557431 GNG3P63215 75 aa11.37□□□□□ -0.59
SLIRP-210ENST00000557431 OR2T5Q6IEZ7 315 aa11.37□□□□□ -0.59
SLIRP-210ENST00000557431 REC114Q7Z4M0 266 aa11.37□□□□□ -0.59
SLIRP-210ENST00000557431 TMEM179BQ7Z7N9 219 aa11.37□□□□□ -0.59
SLIRP-210ENST00000557431 OR2T29Q8NH02 315 aa11.37□□□□□ -0.59
SLIRP-210ENST00000557431 OR5K1Q8NHB7 308 aa11.37□□□□□ -0.59
SLIRP-210ENST00000557431 SDSLQ96GA7 329 aa11.37□□□□□ -0.59
SLIRP-210ENST00000557431 CDCA4Q9BXL8 241 aa11.37□□□□□ -0.59
SLIRP-210ENST00000557431 REEP1Q9H902 201 aa11.37□□□□□ -0.59
SLIRP-210ENST00000557431 RAB18Q9NP72 206 aa11.37□□□□□ -0.59
SLIRP-210ENST00000557431 TCF19Q9Y242 345 aa11.37□□□□□ -0.59
SLIRP-210ENST00000557431 A6NIN4 97 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms