RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 CXorf21Q9HAI6 301 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 BATF3Q9NR55 127 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 DDX18Q9NVP1 670 aaKnown RBP2.38□□□□□ -2.03
VRK1-207ENST00000557352 SOHLH2Q9NX45 425 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 SMPD3Q9NY59 655 aaPredicted RBP2.38□□□□□ -2.03
VRK1-207ENST00000557352 C3orf18Q9UK00 162 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 RAB23Q9ULC3 237 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 IFT52Q9Y366 437 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 HSPE1-MOB4S4R3N1 261 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 ZFHX2Q9C0A1 2572 aaPredicted RBP2.38□□□□□ -2.03
VRK1-207ENST00000557352 ANKRD11Q6UB99 2663 aaPredicted RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 PRRC2CQ9Y520 2896 aaKnown RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 POLEQ07864 2286 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 A0A0G2JN53 185 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 A0A1W2PQD3 144 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 FBLL1A6NHQ2 334 aaKnown RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 TRIM64CA6NLI5 447 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 C5orf58C9J3I9 102 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 G3V2T6 193 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 M0QX08 132 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 FAAHO00519 579 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 IMPA2O14732 288 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 CASKO14936 926 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 POLR1CO15160 346 aaPredicted RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 PPIHO43447 177 aaKnown RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 SNAI2O43623 268 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 MRPS14O60783 128 aaKnown RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 RAMP1O60894 148 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 RDH16O75452 317 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 STX11O75558 287 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 LDOC1O95751 146 aaPredicted RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 LGI1O95970 557 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 CST1P01037 141 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 TGFAP01135 160 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 CLPSP04118 112 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 IFNW1P05000 195 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 BCHEP06276 602 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 DBIP07108 87 aaKnown RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 PABPC4LP0CB38 370 aaKnown RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 ANXA8P13928 327 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 FOLR1P15328 257 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 NCK1P16333 377 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 DRD5P21918 477 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 GABRR1P24046 479 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 PTBP1P26599 531 aaKnown RBP eCLIP2.37□□□□□ -2.03
VRK1-207ENST00000557352 CD82P27701 267 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 NBL1P41271 181 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 PPICP45877 212 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 AQP4P55087 323 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 CXCR4P61073 352 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 ADARB1P78563 741 aaKnown RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 CCL7P80098 99 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 DCDP81605 110 aaKnown RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 HPCAP84074 193 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 VLDLRP98155 873 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 STX4Q12846 297 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 SRSF5Q13243 272 aaKnown RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 MED21Q13503 144 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 C16orf72Q14CZ0 275 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 ZNHIT3Q15649 155 aaPredicted RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 UBE2V2Q15819 145 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 ZNF141Q15928 474 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 DEFB110Q30KQ9 67 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 SLC36A3Q495N2 470 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 NKAIN1Q4KMZ8 207 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 LIN52Q52LA3 116 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 LRRC23Q53EV4 343 aaPredicted RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 SFT2D3Q587I9 215 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 DCST2Q5T1A1 773 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 TTC23Q5W5X9 447 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 FAHD1Q6P587 224 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 TNFAIP8L2Q6P589 184 aaPredicted RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 TMEM205Q6UW68 189 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 ENPP6Q6UWR7 440 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 TMEM107Q6UX40 140 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 HSD17B13Q7Z5P4 300 aaPredicted RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 CYP4Z1Q86W10 505 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 ZNF619Q8N2I2 560 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 CBR4Q8N4T8 237 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 EID2Q8N6I1 236 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 FAM86B1Q8N7N1 296 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 CLDN22Q8N7P3 220 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 ZNF615Q8N8J6 731 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 CCDC71LQ8N9Z2 235 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 MORN4Q8NDC4 146 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 ZNF540Q8NDQ6 660 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 GPR32P1Q8NGA4 272 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 OR5T3Q8NGG3 340 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 OR9A2Q8NGT5 310 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 OR9A4Q8NGU2 314 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 OR5AK3PQ8NH89 298 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 NUBPLQ8TB37 319 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 PNPT1Q8TCS8 783 aaKnown RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 PHF10Q8WUB8 498 aaKnown RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 MAL2Q969L2 176 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 TMBIM1Q969X1 311 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 ADIPOR1Q96A54 375 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 PPWD1Q96BP3 646 aaKnown RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 SLC35E1Q96K37 410 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 SAMD8Q96LT4 415 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 211.6 ms