RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 STUMQ69YW2 141 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 HIST2H3AQ71DI3 136 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 TRMT10CQ7L0Y3 403 aaKnown RBP3.69□□□□□ -1.82
SCFD1-223ENST00000557076 OR2W3Q7Z3T1 314 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 LHFPL4Q7Z7J7 247 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 EGFL6Q8IUX8 553 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 MKXQ8IYA7 352 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 OR5M8Q8NGP6 311 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 OR5K1Q8NHB7 308 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 SPSB4Q96A44 273 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 SLCO4A1Q96BD0 722 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 AKR1E2Q96JD6 320 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 LYZL4Q96KX0 146 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 FMO2Q99518 471 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 COQ7Q99807 217 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 WDR76Q9H967 626 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 HAO2Q9NYQ3 351 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 GRHPRQ9UBQ7 328 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 TBL2Q9Y4P3 447 aaKnown RBP3.69□□□□□ -1.82
SCFD1-223ENST00000557076 A0A1W2PPH5 198 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 PSMB11A5LHX3 300 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 A6NLC8 198 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 A8MZ25 164 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 SEC14L6B5MCN3 397 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 M0R3H8 397 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 SIGLEC5O15389 551 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 RIPK2O43353 540 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 PTP4A3O75365 173 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 ANP32DO95626 131 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 IFNA6P05013 189 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 SNRNP70P08621 437 aaKnown RBP3.68□□□□□ -1.82
SCFD1-223ENST00000557076 ACSM4P0C7M7 580 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 FAM90A13PP0C7W8 464 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 FAM90A24PP0C7X0 464 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 PGA5P0DJD9 388 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 BTF3P20290 206 aaKnown RBP3.68□□□□□ -1.82
SCFD1-223ENST00000557076 RBM34P42696 430 aaKnown RBP3.68□□□□□ -1.82
SCFD1-223ENST00000557076 OR12D2P58182 307 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 CDK6Q00534 326 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 SPIBQ01892 262 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 KIR2DS1Q14954 304 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 SEC23BQ15437 767 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 DUSP7Q16829 419 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 DGUOKQ16854 277 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 ZIK1Q3SY52 487 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-223ENST00000557076 LDLRAD2Q5SZI1 272 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 FAM27D1Q5T7N8 215 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 ZNF770Q6IQ21 691 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-223ENST00000557076 PLBD1Q6P4A8 553 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 WDR82Q6UXN9 313 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 CFAP77Q6ZQR2 320 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 MSANTD1Q6ZTZ1 278 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-223ENST00000557076 ZNF329Q86UD4 541 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 CALHM1Q8IU99 346 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 ZNF695Q8IW36 515 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 FAM71E2Q8N5Q1 922 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 COMMD1Q8N668 190 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 LRRC75AQ8NAA5 344 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 CYB561A3Q8NBI2 242 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 OR11H6Q8NGC7 330 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 OR5T2Q8NGG2 359 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 OR6T1Q8NGN1 323 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 MOSPD2Q8NHP6 518 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 ANGPTL6Q8NI99 470 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 LRRC29Q8WV35 223 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 VPS33AQ96AX1 596 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 SEH1LQ96EE3 360 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 SGTBQ96EQ0 304 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 ITCHQ96J02 903 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 RAB3IPQ96QF0 476 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-223ENST00000557076 ZBTB18Q99592 522 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 DPCDQ9BVM2 203 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-223ENST00000557076 HDHD2Q9H0R4 259 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 ZNF391Q9UJN7 358 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 SLC7A7Q9UM01 511 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 GMEB1Q9Y692 573 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 SIRT4Q9Y6E7 314 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-223ENST00000557076 DNAH10Q8IVF4 4471 aa3.68□□□□□ -1.82
SCFD1-223ENST00000557076 TNCP24821 2201 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 TEX13CA0A0J9YWL9 993 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 CPSF4LA6NMK7 179 aaKnown RBP3.67□□□□□ -1.82
SCFD1-223ENST00000557076 ODF3BA8MYP8 253 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 M0QZK8 103 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 KPNA4O00629 521 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-223ENST00000557076 BHLHE40O14503 412 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 TIPRLO75663 272 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 TNFRSF6BO95407 300 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 LY6G6CO95867 125 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 CSTBP04080 98 aaKnown RBP3.67□□□□□ -1.82
SCFD1-223ENST00000557076 ARG1P05089 322 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 HCKP08631 526 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 SELLP14151 372 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 CTLA4P16410 223 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 DDOSTP39656 456 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 OR3A4PP47883 348 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 CDX1P47902 265 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-223ENST00000557076 ENTPD1P49961 510 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 RPL14P50914 215 aaKnown RBP3.67□□□□□ -1.82
SCFD1-223ENST00000557076 NME5P56597 212 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms