RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 OR5A2Q8NGI9 324 aa6.09□□□□□ -1.44
SCFD1-222ENST00000556768 OR10Z1Q8NGY1 313 aa6.09□□□□□ -1.44
SCFD1-222ENST00000556768 TMEM163Q8TC26 289 aa6.09□□□□□ -1.44
SCFD1-222ENST00000556768 OR5P3Q8WZ94 311 aa6.09□□□□□ -1.44
SCFD1-222ENST00000556768 CENPNQ96H22 339 aaPredicted RBP6.09□□□□□ -1.44
SCFD1-222ENST00000556768 IL4I1Q96RQ9 567 aa6.09□□□□□ -1.44
SCFD1-222ENST00000556768 ADI1Q9BV57 179 aa6.09□□□□□ -1.44
SCFD1-222ENST00000556768 PBOV1Q9GZY1 135 aa6.09□□□□□ -1.44
SCFD1-222ENST00000556768 DNTTIP1Q9H147 329 aa6.09□□□□□ -1.44
SCFD1-222ENST00000556768 CNTD2Q9H8S5 307 aa6.09□□□□□ -1.44
SCFD1-222ENST00000556768 MOB1AQ9H8S9 216 aa6.09□□□□□ -1.44
SCFD1-222ENST00000556768 HAO2Q9NYQ3 351 aa6.09□□□□□ -1.44
SCFD1-222ENST00000556768 ZNF319Q9P2F9 582 aa6.09□□□□□ -1.44
SCFD1-222ENST00000556768 KAAG1Q9UBP8 84 aa6.09□□□□□ -1.44
SCFD1-222ENST00000556768 ENPP5Q9UJA9 477 aa6.09□□□□□ -1.44
SCFD1-222ENST00000556768 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.09□□□□□ -1.44
SCFD1-222ENST00000556768 CAB39Q9Y376 341 aaPredicted RBP6.09□□□□□ -1.44
SCFD1-222ENST00000556768 IGHV3OR15-7A0A075B7D8 119 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 IGHV3OR16-10A0A075B7F0 116 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 A0A1B0GVI7 797 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 OR5B21A6NL26 309 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 SNTNA6NMZ2 147 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 LOC110117498-PIK3R3F6TDL0 507 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 CLDN34H7C241 214 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 PRKYO43930 277 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 KRT8P05787 483 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 IGHV4-38-2P0DP08 117 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 CFPP27918 469 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 GPM6AP51674 278 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 CDC42P60953 191 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 GMFBP60983 142 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 ARF6P62330 175 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 CSNK2BP67870 215 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 CEACAM21Q3KPI0 293 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 CDONQ4KMG0 1287 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 FAM76BQ5HYJ3 339 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 ZNF684Q5T5D7 378 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 KDM4DQ6B0I6 523 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 CCDC121Q6ZUS5 278 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 C9orf139Q6ZV77 190 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 AMIGO2Q86SJ2 522 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 ZDHHC22Q8N966 263 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 OR8J1Q8NGP2 316 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 OR51E1Q8TCB6 317 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 FAM71F1Q96KD3 344 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-222ENST00000556768 WDFY2Q96P53 400 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 DUX5Q96PT3 197 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 MYCBPQ99417 103 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-222ENST00000556768 CCL13Q99616 98 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 RBM4BQ9BQ04 359 aaKnown RBP6.08□□□□□ -1.44
SCFD1-222ENST00000556768 NOX4Q9NPH5 578 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 CLN6Q9NWW5 311 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 IMPAD1Q9NX62 359 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 WARS2Q9UGM6 360 aaKnown RBP6.08□□□□□ -1.44
SCFD1-222ENST00000556768 PIGLQ9Y2B2 252 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 FAM96BQ9Y3D0 163 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 SNX5Q9Y5X3 404 aa6.08□□□□□ -1.44
SCFD1-222ENST00000556768 DNAJC9-AS1A6NH13 148 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 ZAR1LA6NP61 321 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 SRRM5B3KS81 715 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 ZNF732B4DXR9 585 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 AKR7A2O43488 359 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 DHRS3O75911 302 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 PLATP00750 562 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 SERPINA3P01011 423 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 NRASP01111 189 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 RNASE1P07998 156 aaKnown RBP6.07□□□□□ -1.44
SCFD1-222ENST00000556768 GLRA1P23415 457 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 EEF1B2P24534 225 aaKnown RBP6.07□□□□□ -1.44
SCFD1-222ENST00000556768 ACKR3P25106 362 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 GABRA2P47869 451 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 IL13RA1P78552 427 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 IKZF1Q13422 519 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 BLMHQ13867 455 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 WDR38Q5JTN6 314 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 CEP78Q5JTW2 689 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 LCE2CQ5TA81 110 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 BCL2L15Q5TBC7 163 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 SLX4IPQ5VYV7 408 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 PLCXD3Q63HM9 321 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 C16orf87Q6PH81 154 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 BRD3OSQ6XYD6 125 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 ZNF573Q86YE8 665 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 SLC35F2Q8IXU6 374 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 BCL6BQ8N143 479 aaPredicted RBP6.07□□□□□ -1.44
SCFD1-222ENST00000556768 SCCPDHQ8NBX0 429 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 OR51G2Q8NGK0 314 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 SGMS2Q8NHU3 365 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 NRG4Q8WWG1 115 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 TRUB1Q8WWH5 349 aaKnown RBP6.07□□□□□ -1.44
SCFD1-222ENST00000556768 H1FXQ92522 213 aaKnown RBP6.07□□□□□ -1.44
SCFD1-222ENST00000556768 RPL3LQ92901 407 aaKnown RBP6.07□□□□□ -1.44
SCFD1-222ENST00000556768 TMIGD2Q96BF3 282 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 DUS3LQ96G46 650 aaKnown RBP6.07□□□□□ -1.44
SCFD1-222ENST00000556768 OR8B4Q96RC9 309 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 CIB1Q99828 191 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 TLNRD1Q9H1K6 362 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 SEMA6AQ9H2E6 1030 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 PLEKHA1Q9HB21 404 aa6.07□□□□□ -1.44
SCFD1-222ENST00000556768 ESM1Q9NQ30 184 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms