RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 KIAA1324LA8MWY0 1029 aaPredicted RBP8.06□□□□□ -1.12
SRP54-210ENST00000556380 ZNF732B4DXR9 585 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 H3BSH0 61 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 LGALS8O00214 317 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 OGG1O15527 345 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 PLPP2O43688 288 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 CRLF1O75462 422 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 ZFPL1O95159 310 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 LALBAP00709 142 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 MSMBP08118 114 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 RPSAP08865 295 aaKnown RBP8.06□□□□□ -1.12
SRP54-210ENST00000556380 IRF2P14316 349 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 C21orf33P30042 268 aaPredicted RBP8.06□□□□□ -1.12
SRP54-210ENST00000556380 HSPA13P48723 471 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 GPM6AP51674 278 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 GTF2A1P52655 376 aaPredicted RBP8.06□□□□□ -1.12
SRP54-210ENST00000556380 GNG3P63215 75 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 MRPL28Q13084 256 aaKnown RBP8.06□□□□□ -1.12
SRP54-210ENST00000556380 UBE2V2Q15819 145 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 OR2G6Q5TZ20 316 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 TEX36Q5VZQ5 186 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 XAF1Q6GPH4 301 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 FAM166AQ6J272 317 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 IZUMO2Q6UXV1 221 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 ZNF841Q6ZN19 808 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 MUC20Q8N307 709 aaPredicted RBP8.06□□□□□ -1.12
SRP54-210ENST00000556380 SCCPDHQ8NBX0 429 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 C19orf18Q8NEA5 215 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 BPIFB6Q8NFQ5 453 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 OR51A4Q8NGJ6 313 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 OR10Z1Q8NGY1 313 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 C10orf35Q96D05 121 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 RAB39BQ96DA2 213 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 ADAT3Q96EY9 351 aaPredicted RBP8.06□□□□□ -1.12
SRP54-210ENST00000556380 HIST1H2AAQ96QV6 131 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 ANKRD60Q9BZ19 345 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 GPR173Q9NS66 373 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 BABAM2Q9NXR7 383 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 UBAP1Q9NZ09 502 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 POLR3KQ9Y2Y1 108 aaPredicted RBP8.06□□□□□ -1.12
SRP54-210ENST00000556380 EXOSC1Q9Y3B2 195 aaKnown RBP8.06□□□□□ -1.12
SRP54-210ENST00000556380 SIRT4Q9Y6E7 314 aaPredicted RBP8.06□□□□□ -1.12
SRP54-210ENST00000556380 COL6A5A8TX70 2615 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 ARHGAP32A7KAX9 2087 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 TRAV20A0A0B4J274 112 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 IGKV1-9A0A0C4DH69 117 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 ANKRD61A6NGH8 418 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 OOEPA6NGQ2 149 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 A6NLC8 198 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 A8MXK9 166 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 SRRM5B3KS81 715 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 FCN3O75636 299 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 RHBDL1O75783 438 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 ZNF12P17014 697 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 AMY2BP19961 511 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 CD80P33681 288 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 GBX2P52951 348 aaPredicted RBP8.05□□□□□ -1.12
SRP54-210ENST00000556380 SEC61A1P61619 476 aaKnown RBP8.05□□□□□ -1.12
SRP54-210ENST00000556380 PAX2Q02962 417 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 CCDC58Q4VC31 144 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 RNLSQ5VYX0 342 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 PLCXD3Q63HM9 321 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 SFRP4Q6FHJ7 346 aaPredicted RBP8.05□□□□□ -1.12
SRP54-210ENST00000556380 RPL22L1Q6P5R6 122 aaKnown RBP8.05□□□□□ -1.12
SRP54-210ENST00000556380 LYPD2Q6UXB3 125 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 TMPRSS11AQ6ZMR5 421 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 UTS2BQ765I0 119 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 FAM90A1Q86YD7 464 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 KLHL36Q8N4N3 616 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 DEFB108BQ8NET1 73 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 OR52N1Q8NH53 320 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 LRRC29Q8WV35 223 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 GATAD2BQ8WXI9 593 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 AQP3Q92482 292 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 RGP1Q92546 391 aaPredicted RBP8.05□□□□□ -1.12
SRP54-210ENST00000556380 SGCDQ92629 289 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 TMEM186Q96B77 213 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 FGGYQ96C11 551 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 SEH1LQ96EE3 360 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 CHST5Q9GZS9 411 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 DUSP21Q9H596 190 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 LPAR2Q9HBW0 351 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 HIF1ANQ9NWT6 349 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 MIOXQ9UGB7 285 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 KCNS2Q9ULS6 477 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 HHLA2Q9UM44 414 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 RRP15Q9Y3B9 282 aaKnown RBP8.05□□□□□ -1.12
SRP54-210ENST00000556380 PCDHGB5Q9Y5G0 923 aa8.05□□□□□ -1.12
SRP54-210ENST00000556380 IGKV1-27A0A075B6S5 117 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 TRAV38-1A0A0B4J264 116 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 PPIAL4CA0A0B4J2A2 164 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 hCG_1807616A0A1W2PRN6 198 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 TMEM212A6NML5 194 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 TRAPPC2LH3BP13 241 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 SLC1A7O00341 560 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 RRP9O43818 475 aaKnown RBP8.04□□□□□ -1.12
SRP54-210ENST00000556380 NOS1APO75052 506 aaPredicted RBP8.04□□□□□ -1.12
SRP54-210ENST00000556380 CDK1P06493 297 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 ACAA1P09110 424 aaPredicted RBP8.04□□□□□ -1.12
SRP54-210ENST00000556380 CCDC159P0C7I6 412 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms