RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 PPIL1Q9Y3C6 166 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 KPTNQ9Y664 436 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 TRAV8-6A0A0B4J262 113 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 A0A0J9YYE9 177 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 LOC100653049A0A140TA62 436 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 A0A1W2PPV4 95 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 TMEM72A0PK05 275 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 GOLGA8JA6NMD2 632 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 CEACAM18A8MTB9 384 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 A8MWL6 223 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 PRAMEF26H0Y7S4 382 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 J3QT63 122 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 MYL12BO14950 172 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 GMDSO60547 372 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 SCO1O75880 301 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 KRT34O76011 436 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 PLEKHA8P1O95397 391 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 ETHE1O95571 254 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 OTCP00480 354 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 TRBC1P01850 177 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 GOLGA8HP0CJ92 632 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 COL8A2P25067 703 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 MLF1P58340 268 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 PPP1CAP62136 330 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 PSMC5P62195 406 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 RBX1P62877 108 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 SLC35B1P78383 322 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 C2orf54Q08AI8 447 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 ST3GAL4Q11206 333 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 BTN1A1Q13410 526 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 FBXL19-AS1Q494R0 122 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 ZNF678Q5SXM1 525 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 EPGNQ6UW88 154 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 CASP12Q6UXS9 341 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 NT5DC3Q86UY8 548 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 LINC00304Q8N9R0 145 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 OR51L1Q8NGJ5 315 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 OR6K6Q8NGW6 343 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 MRPL48Q96GC5 212 aaKnown RBP1.41□□□□□ -2.18
SCFD1-218ENST00000556256 MS4A8Q9BY19 250 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 LHX5Q9H2C1 402 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 IL37Q9NZH6 218 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 TFR2Q9UP52 801 aa1.41□□□□□ -2.18
SCFD1-218ENST00000556256 RPRD2Q5VT52 1461 aaKnown RBP1.41□□□□□ -2.18
SCFD1-218ENST00000556256 ADGRL1O94910 1474 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 LOC102724200A0A096LPH7 203 aaPredicted RBP1.4□□□□□ -2.19
SCFD1-218ENST00000556256 TRAV8-4A0A0B4J246 113 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 ISPDA4D126 451 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 UPK1AO00322 258 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 MFNGO00587 321 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 FSTL3O95633 263 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 P01737 135 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 MAS1P04201 325 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 PAX6P26367 422 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 TGFBR1P36897 503 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 GALR1P47211 349 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 TGM4P49221 684 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 MTPNP58546 118 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 IL15RAQ13261 267 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 TMEM136Q6ZRR5 245 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 BBS7Q8IWZ6 715 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 LINC00337Q8N6G1 96 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 LINC00469Q8N7U9 141 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 TMEM104Q8NE00 496 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 OR4A15Q8NGL6 344 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 ZFAND1Q8TCF1 268 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 TMEM159Q96B96 161 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 TSNAXQ99598 290 aaKnown RBP1.4□□□□□ -2.19
SCFD1-218ENST00000556256 PDCD1LG2Q9BQ51 273 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 C20orf144Q9BQM9 153 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 C1orf50Q9BV19 199 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 RWDD2AQ9UIY3 292 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 MUC6Q6W4X9 2439 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 SIGLEC1Q9BZZ2 1709 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.4□□□□□ -2.19
SCFD1-218ENST00000556256 GPR179Q6PRD1 2367 aa1.4□□□□□ -2.19
SCFD1-218ENST00000556256 CLDN34H7C241 214 aa1.39□□□□□ -2.19
SCFD1-218ENST00000556256 ALOX12BO75342 701 aa1.39□□□□□ -2.19
SCFD1-218ENST00000556256 PTTG1O95997 202 aa1.39□□□□□ -2.19
SCFD1-218ENST00000556256 IGHV1-46P01743 117 aa1.39□□□□□ -2.19
SCFD1-218ENST00000556256 OR5AL1P0C617 328 aa1.39□□□□□ -2.19
SCFD1-218ENST00000556256 MPIP34949 423 aa1.39□□□□□ -2.19
SCFD1-218ENST00000556256 P2RY2P41231 377 aa1.39□□□□□ -2.19
SCFD1-218ENST00000556256 RPL31P62899 125 aaKnown RBP1.39□□□□□ -2.19
SCFD1-218ENST00000556256 GRB2P62993 217 aaKnown RBP1.39□□□□□ -2.19
SCFD1-218ENST00000556256 FLI1Q01543 452 aaPredicted RBP1.39□□□□□ -2.19
SCFD1-218ENST00000556256 MEF2CQ06413 473 aaPredicted RBP1.39□□□□□ -2.19
SCFD1-218ENST00000556256 ATP6V1FQ16864 119 aa1.39□□□□□ -2.19
SCFD1-218ENST00000556256 CAVIN4Q5BKX8 364 aa1.39□□□□□ -2.19
SCFD1-218ENST00000556256 TMEM69Q5SWH9 247 aa1.39□□□□□ -2.19
SCFD1-218ENST00000556256 HHATQ5VTY9 493 aa1.39□□□□□ -2.19
SCFD1-218ENST00000556256 SETD3Q86TU7 594 aaPredicted RBP1.39□□□□□ -2.19
SCFD1-218ENST00000556256 CYB561A3Q8NBI2 242 aa1.39□□□□□ -2.19
SCFD1-218ENST00000556256 C1orf64Q8NEQ6 169 aa1.39□□□□□ -2.19
SCFD1-218ENST00000556256 OR1P1Q8NH06 330 aa1.39□□□□□ -2.19
SCFD1-218ENST00000556256 OR51A7Q8NH64 312 aa1.39□□□□□ -2.19
SCFD1-218ENST00000556256 ZBED3Q96IU2 234 aaPredicted RBP1.39□□□□□ -2.19
SCFD1-218ENST00000556256 Q96MT0 163 aa1.39□□□□□ -2.19
SCFD1-218ENST00000556256 SPACA5Q96QH8 159 aa1.39□□□□□ -2.19
SCFD1-218ENST00000556256 ANGPTL4Q9BY76 406 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms