RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 Q8TCH9 128 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 NRGNQ92686 78 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 RDH5Q92781 318 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 MBD6Q96DN6 1003 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 LURAP1Q96LR2 239 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 SORCS2Q96PQ0 1159 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 UQCC2Q9BRT2 126 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 GSX2Q9BZM3 304 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 PKIBQ9C010 78 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 METTL17Q9H7H0 456 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-221ENST00000555773 GCM1Q9NP62 436 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 MYOZ1Q9NP98 299 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-221ENST00000555773 PPP1R3CQ9UQK1 317 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 POLDIP2Q9Y2S7 368 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 CEPT1Q9Y6K0 416 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 V9GY05 133 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 USF3Q68DE3 2245 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 HRNRQ86YZ3 2850 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-221ENST00000555773 IGKV1-27A0A075B6S5 117 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 IGHV1-69-2A0A0G2JMI3 117 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 LRRC30A6NM36 301 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 J3QT63 122 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 CDIPTO14735 213 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 TMEM127O75204 238 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 FLNBO75369 2602 aaKnown RBP10.54□□□□□ -0.72
SHMT2-221ENST00000555773 NCR1O76036 304 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 CYB5AP00167 134 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 IL1AP01583 271 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 HPXP02790 462 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 ADRA2CP18825 462 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 RAB3BP20337 219 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 MPZP25189 248 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 SDC2P34741 201 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 LSM3P62310 102 aaKnown RBP10.54□□□□□ -0.72
SHMT2-221ENST00000555773 IL24Q13007 206 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 PDZK1IP1Q13113 114 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 RIN1Q13671 783 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 MPPED2Q15777 294 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 C1orf100Q5SVJ3 147 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 ARFGEF3Q5TH69 2177 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 HAGHLQ6PII5 290 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-221ENST00000555773 WDR86Q86TI4 376 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 ANGPTL5Q86XS5 388 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 LYPD6Q86Y78 171 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 C11orf53Q8IXP5 236 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 MKXQ8IYA7 352 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 SAXO1Q8IYX7 474 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 LRRC75A-AS1Q8N1F1 130 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 PNLDC1Q8NA58 520 aaKnown RBP10.54□□□□□ -0.72
SHMT2-221ENST00000555773 ZSCAN4Q8NAM6 433 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-221ENST00000555773 SCCPDHQ8NBX0 429 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 OR11L1Q8NGX0 322 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 OR10Z1Q8NGY1 313 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 AQP3Q92482 292 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 HPS1Q92902 700 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 GPER1Q99527 375 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 NAA50Q9GZZ1 169 aaKnown RBP10.54□□□□□ -0.72
SHMT2-221ENST00000555773 RNF167Q9H6Y7 350 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 RHOFQ9HBH0 211 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 BAHCC1Q9P281 2608 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 PLEKHA6Q9Y2H5 1048 aa10.54□□□□□ -0.72
SHMT2-221ENST00000555773 AK6Q9Y3D8 172 aaKnown RBP10.54□□□□□ -0.72
SHMT2-221ENST00000555773 DSCAMO60469 2012 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 RAI1Q7Z5J4 1906 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-221ENST00000555773 SHISA3A0PJX4 238 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 A6NLC8 198 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 ZNF701M0R085 212 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-221ENST00000555773 SLC22A1O15245 554 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 NOS1APO75052 506 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-221ENST00000555773 CDRT1O95170 752 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 TMEM225BP0DP42 221 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 IRF2P14316 349 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 DAOP14920 347 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 PMELP40967 661 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 PTGFRP43088 359 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 TMEM33P57088 247 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 VBP1P61758 197 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 HFEQ30201 348 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 DEFB113Q30KQ7 82 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 SPRNQ5BIV9 151 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 PRAMEF6Q5VXH4 476 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 ASCL4Q6XD76 172 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 USP43Q70EL4 1123 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 MOGAT3Q86VF5 341 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 CALHM1Q8IU99 346 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 CROCCP3Q8IVE0 287 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 C1orf87Q8N0U7 546 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 JAGN1Q8N5M9 183 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 PXT1Q8NFP0 134 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 DGCR14Q96DF8 476 aaKnown RBP10.53□□□□□ -0.72
SHMT2-221ENST00000555773 SPACA5Q96QH8 159 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 BATF3Q9NR55 127 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 PCDHB16Q9NRJ7 776 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 UFSP2Q9NUQ7 469 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 C1orf123Q9NWV4 160 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 RNF7Q9UBF6 113 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 GHRLQ9UBU3 117 aa10.53□□□□□ -0.72
SHMT2-221ENST00000555773 IGHV3-64DA0A0J9YX35 117 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 DPPA5A6NC42 116 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 NOTOA8MTQ0 251 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms