RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 FBXW9Q5XUX1 488 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 BCORP1Q8N888 145 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 GATSQ8NAP1 163 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 SCGB3A2Q96PL1 93 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 KIR2DL5BA0A0G2JN68 375 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 KIR2DL5BA0A0G2JPC4 375 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 B4DEV8 164 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 TRDCB7Z8K6 153 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 CST2P09228 141 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 FOLR1P15328 257 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 COL9A1P20849 921 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 APOBEC1P41238 236 aaKnown RBP13.83□□□□□ -0.19
SYNE3-203ENST00000554873 CEBPGP53567 150 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 CLDN6P56747 220 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 TLE4Q04727 773 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 ZNF74Q16587 644 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 DEFB110Q30KQ9 67 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 NCR3LG1Q68D85 454 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 FDX2Q6P4F2 183 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 C9orf40Q8IXQ3 194 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 KIR2DL5AQ8N109 375 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 FAM213BQ8TBF2 198 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 BADQ92934 168 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 CMBLQ96DG6 245 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 DIRC2Q96SL1 478 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 CCDC3Q9BQI4 270 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 FAM60AQ9NP50 221 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 TAS2R4Q9NYW5 299 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 HIF3AQ9Y2N7 669 aa13.83□□□□□ -0.19
SYNE3-203ENST00000554873 DCDC2BA2VCK2 349 aa13.83□□□□□ -0.2
SYNE3-203ENST00000554873 ALOX5APP20292 161 aa13.83□□□□□ -0.2
SYNE3-203ENST00000554873 RND2P52198 227 aa13.83□□□□□ -0.2
SYNE3-203ENST00000554873 GABREP78334 506 aa13.83□□□□□ -0.2
SYNE3-203ENST00000554873 FAM46BQ96A09 425 aa13.83□□□□□ -0.2
SYNE3-203ENST00000554873 URM1Q9BTM9 101 aaKnown RBP13.83□□□□□ -0.2
SYNE3-203ENST00000554873 WDR76Q9H967 626 aa13.83□□□□□ -0.2
SYNE3-203ENST00000554873 LPAR2Q9HBW0 351 aa13.83□□□□□ -0.2
SYNE3-203ENST00000554873 A0A0J9YY10 115 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 MEGF11A6BM72 1044 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 IGFBP3P17936 291 aaPredicted RBP13.82□□□□□ -0.2
SYNE3-203ENST00000554873 FPR2P25090 351 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 MMP16P51512 607 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 IAH1Q2TAA2 248 aaPredicted RBP13.82□□□□□ -0.2
SYNE3-203ENST00000554873 ALG10Q5BKT4 473 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 DPY19L4Q7Z388 723 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 RABEPKQ7Z6M1 372 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 CPEB3Q8NE35 698 aaKnown RBP13.82□□□□□ -0.2
SYNE3-203ENST00000554873 OR6N2Q8NGY6 317 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 OR4X1Q8NH49 305 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 RPP25Q9BUL9 199 aaKnown RBP13.82□□□□□ -0.2
SYNE3-203ENST00000554873 NCOR1P1Q9H4R4 102 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 DOCK8Q8NF50 2099 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 REV3LO60673 3130 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 DHRS7CA6NNS2 312 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 K7N7A8 449 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 MMP7P09237 267 aaPredicted RBP13.82□□□□□ -0.2
SYNE3-203ENST00000554873 FSTP19883 344 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 PI3P19957 117 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 RPL29P47914 159 aaKnown RBP13.82□□□□□ -0.2
SYNE3-203ENST00000554873 ITPRIPL2Q3MIP1 535 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 SLC25A26Q70HW3 274 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 ZNF761Q86XN6 746 aaPredicted RBP13.82□□□□□ -0.2
SYNE3-203ENST00000554873 TMEM156Q8N614 296 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 C16orf52Q8NHV5 167 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 FAAP24Q9BTP7 215 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 TMEM14AQ9Y6G1 99 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 TRBV24-1A0A075B6N3 115 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 MED19A0JLT2 244 aaPredicted RBP13.82□□□□□ -0.2
SYNE3-203ENST00000554873 TCF21O43680 179 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 CA11O75493 328 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 NTSR1P30989 418 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 RND3P61587 244 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 BTG2P78543 158 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 TMEM184AQ6ZMB5 413 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 SLC16A14Q7RTX9 510 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 OR10A7Q8NGE5 316 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 ZNF524Q96C55 264 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 RTBDNQ9BSG5 229 aaPredicted RBP13.82□□□□□ -0.2
SYNE3-203ENST00000554873 SH3BGRL3Q9H299 93 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 TMEM242Q9NWH2 141 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 GAB2Q9UQC2 676 aa13.82□□□□□ -0.2
SYNE3-203ENST00000554873 A0A1W2PQF6 199 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 FIGNL2A6NMB9 653 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 SIAH2O43255 324 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 FUT3P21217 361 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 VAX1Q5SQQ9 334 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 C1orf100Q5SVJ3 147 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 BTNL3Q6UXE8 466 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 Q7L0L9 218 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 ATG4DQ86TL0 474 aaPredicted RBP13.81□□□□□ -0.2
SYNE3-203ENST00000554873 OR13C3Q8NGS6 347 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 ASB5Q8WWX0 329 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 LPAR4Q99677 370 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 WFDC1Q9HC57 220 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 MMP25Q9NPA2 562 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 SLC22A13Q9Y226 551 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 CLDN34H7C241 214 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 FGF5P12034 268 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 GPR3P46089 330 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 EGR4Q05215 589 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms