RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 TPRA1Q86W33 373 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 ZFP41Q8N8Y5 198 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 OR2AJ1Q8NGZ0 328 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 OR2G2Q8NGZ5 317 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 SGMS2Q8NHU3 365 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 TAF15Q92804 592 aaKnown RBP eCLIP8.86□□□□□ -0.99
SHMT2-215ENST00000554656 GHSRQ92847 366 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 RNF166Q96A37 237 aaPredicted RBP8.86□□□□□ -0.99
SHMT2-215ENST00000554656 DACT3Q96B18 629 aaPredicted RBP8.86□□□□□ -0.99
SHMT2-215ENST00000554656 HAVCR1Q96D42 359 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 OR2V2Q96R30 315 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 TMED9Q9BVK6 235 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 MOB1AQ9H8S9 216 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 POLR1DQ9Y2S0 133 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 ZNF281Q9Y2X9 895 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 INSIG2Q9Y5U4 225 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 LHFPL6Q9Y693 200 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 TRAV1-2A0A0B4J238 106 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 PNMA8CA0A1B0GUJ8 204 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 ACOD1A6NK06 481 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 OR4C45A6NMZ5 311 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 CEACAM18A8MTB9 384 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 TMEM178BH3BS89 294 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 TMPRSS2O15393 492 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 ARL6IP5O75915 188 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 ZNF205O95201 554 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 IGHV4-38-2P0DP08 117 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 PSKH1P11801 424 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 FPR2P25090 351 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 MAPK3P27361 379 aaPredicted RBP8.85□□□□□ -0.99
SHMT2-215ENST00000554656 OPRL1P41146 370 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 MTNR1BP49286 362 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 ZNF829Q3KNS6 432 aaPredicted RBP8.85□□□□□ -0.99
SHMT2-215ENST00000554656 ZNF404Q494X3 552 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 C22orf42Q6IC83 251 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 LRRN1Q6UXK5 716 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 TMEM91Q6ZNR0 172 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 CROCCP3Q8IVE0 287 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 OR5AS1Q8N127 324 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 SPICQ8N5J4 248 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 GJC3Q8NFK1 279 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 OR10AD1Q8NGE0 317 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 TMEM203Q969S6 136 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 SLAMF6Q96DU3 332 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 MAP6Q96JE9 813 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 AMELYQ99218 206 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 TTTY10Q9BZA0 68 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 SLIRPQ9GZT3 109 aaKnown RBP8.85□□□□□ -0.99
SHMT2-215ENST00000554656 COMMD4Q9H0A8 199 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 GCM1Q9NP62 436 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 PLEK2Q9NYT0 353 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 PTTG3PQ9NZH4 202 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 ASH2LQ9UBL3 628 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 IL19Q9UHD0 177 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 NUP50Q9UKX7 468 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 PPP1R3CQ9UQK1 317 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 LRP12Q9Y561 859 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 AUP1Q9Y679 476 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 R4GMQ9 66 aa8.85□□□□□ -0.99
SHMT2-215ENST00000554656 IGHV3OR16-10A0A075B7F0 116 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 IGHV3-64DA0A0J9YX35 117 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 TRBV5-5A0A0J9YX44 114 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 ANKRD61A6NGH8 418 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 ZNF879B4DU55 563 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 H0YL77 283 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 RER1O15258 196 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 MLNRO43193 412 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 SRSF10O75494 262 aaKnown RBP8.84□□□□□ -0.99
SHMT2-215ENST00000554656 APOC1P02654 83 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 WNT2P09544 360 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 UCHL1P09936 223 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 H2BFMP0C1H6 154 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 RAC2P15153 192 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 TNFRSF1AP19438 455 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 TNFSF4P23510 183 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 PRTN3P24158 256 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 CD80P33681 288 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 PSMB10P40306 273 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 MDH2P40926 338 aaKnown RBP8.84□□□□□ -0.99
SHMT2-215ENST00000554656 RPS27P42677 84 aaKnown RBP8.84□□□□□ -0.99
SHMT2-215ENST00000554656 PRSS12P56730 875 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 NANOS3P60323 173 aaKnown RBP8.84□□□□□ -0.99
SHMT2-215ENST00000554656 RPS11P62280 158 aaKnown RBP eCLIP8.84□□□□□ -0.99
SHMT2-215ENST00000554656 GRB2P62993 217 aaKnown RBP8.84□□□□□ -0.99
SHMT2-215ENST00000554656 PAX8Q06710 450 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 ECH1Q13011 328 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 RSPO1Q2MKA7 263 aaPredicted RBP8.84□□□□□ -0.99
SHMT2-215ENST00000554656 PRR31Q5SQ13 230 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 FAM201AQ5SY85 155 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 OR2T2Q6IF00 324 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 FBXW12Q6X9E4 464 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 CATSPERDQ86XM0 798 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.84□□□□□ -0.99
SHMT2-215ENST00000554656 LINC00346Q8IVM7 164 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 OR5AK2Q8NH90 309 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 OR1F12Q8NHA8 337 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 TBC1D15Q8TC07 691 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 S100ZQ8WXG8 99 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 SLC25A46Q96AG3 418 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 MEGF10Q96KG7 1140 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms