RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 LRRC10Q5BKY1 277 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 CLVS2Q5SYC1 327 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 ZNF684Q5T5D7 378 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 PLCXD3Q63HM9 321 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 ZNF788Q6ZQV5 615 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 KIR3DL3Q8N743 410 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 FAM216BQ8N7L0 139 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 ANGPTL6Q8NI99 470 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 C8orf46Q8TAG6 207 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 ZNF671Q8TAW3 534 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 PYDC1Q8WXC3 89 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 ST8SIA4Q92187 359 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 MED30Q96HR3 178 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 FAM71F1Q96KD3 344 aaPredicted RBP8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 HRASLS5Q96KN8 279 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 CCL13Q99616 98 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 APOL4Q9BPW4 351 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 PCGF1Q9BSM1 259 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 TTTY10Q9BZA0 68 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 RASSF4Q9H2L5 321 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 CNTD2Q9H8S5 307 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 NOX4Q9NPH5 578 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 RASL12Q9NYN1 266 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 OR52A1Q9UKL2 312 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 PIGLQ9Y2B2 252 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 ORC6Q9Y5N6 252 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 V9GYS6 101 aa8.6□□□□□ -1.03
PTCD2P1-201ENST00000554393 NOTCH1P46531 2555 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 IGHV3OR16-10A0A075B7F0 116 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 A0A1B0GTI1 187 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 A0A1B0GVI7 797 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 A0A1B0GW55 424 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 A0A1W2PQL4 384 aaPredicted RBP8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 METTL15A6NJ78 407 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 E9PQ18 207 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 H3BNX3 289 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 SIGLEC5O15389 551 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 AKR7A2O43488 359 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 NRASP01111 189 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 DUX4L2P0CJ85 424 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 DUX4L3P0CJ86 424 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 DUX4L4P0CJ87 422 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 DUX4L5P0CJ88 424 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 DUX4L6P0CJ89 424 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 DUX4L7P0CJ90 424 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 GLRA1P23415 457 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 CFPP27918 469 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 CAV3P56539 151 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 IL13RA1P78552 427 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 FOXL1Q12952 345 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 KPNB1Q14974 876 aaKnown RBP8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 SLC9A3R2Q15599 337 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 CEP78Q5JTW2 689 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 SLC25A30Q5SVS4 291 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 DUX4L9Q6RFH8 374 aaPredicted RBP8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 METAP1DQ6UB28 335 aaPredicted RBP8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 BRD3OSQ6XYD6 125 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 MOB3CQ70IA8 216 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 TMEM86BQ8N661 226 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 CCDC54Q8NEL0 328 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 OR14K1Q8NGZ2 314 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 GATAD2BQ8WXI9 593 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 AQP3Q92482 292 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 EME1Q96AY2 570 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 TMIGD2Q96BF3 282 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 SEH1LQ96EE3 360 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 DCTN5Q9BTE1 182 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 WDR13Q9H1Z4 485 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 IMPAD1Q9NX62 359 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 NLKQ9UBE8 527 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 DUX4Q9UBX2 424 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 GTF2A1LQ9UNN4 478 aa8.59□□□□□ -1.03
PTCD2P1-201ENST00000554393 IGHV1-69DA0A0B4J2H0 117 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 CENPVL3A0A0U1RRI6 287 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 OR2AT4A6NND4 320 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 J3QT63 122 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 EI24O14681 340 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 MAGEB4O15481 346 aaPredicted RBP8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 NOS1APO75052 506 aaPredicted RBP8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 RHBDL1O75783 438 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 IGHV1-69P01742 117 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 ACAA1P09110 424 aaPredicted RBP8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 ATP6V1E1P36543 226 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 ALDH3A2P51648 485 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 ISL1P61371 349 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 SNRPGP62308 76 aaKnown RBP8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 ARF6P62330 175 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 ACTC1P68032 377 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 ACTA1P68133 377 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 IKZF1Q13422 519 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 DEFB112Q30KQ8 113 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 SMIM21Q3B7S5 101 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 AWAT1Q58HT5 328 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 MEDAGQ5VYS4 303 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 PLEKHG7Q6ZR37 379 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 C1orf122Q6ZSJ8 110 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 SSX6Q7RTT6 188 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 CATSPERDQ86XM0 798 aa8.58□□□□□ -1.04
PTCD2P1-201ENST00000554393 ZNF573Q86YE8 665 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms