RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 RAB13P51153 203 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 CLDN15P56746 228 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 DEGS2Q6QHC5 323 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 VASH2Q86V25 355 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 TMEM200AQ86VY9 491 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 OR2M7Q8NG81 312 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 FOXRED1Q96CU9 486 aaPredicted RBP12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 ZNF845Q96IR2 970 aaPredicted RBP12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 CNTD2Q9H8S5 307 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 COA4Q9NYJ1 87 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 ZNF629Q9UEG4 869 aaPredicted RBP12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 BOKQ9UMX3 212 aaPredicted RBP12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 RHBDD3Q9Y3P4 386 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 CEP250Q9BV73 2442 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 ZNF407Q9C0G0 2248 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 DMXL2Q8TDJ6 3036 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 ARGFXA6NJG6 315 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 TTLL8A6PVC2 850 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 H0YIZ8 118 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 PMP2P02689 132 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 MMP16P51512 607 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 TCF15Q12870 199 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 SRSF6Q13247 344 aaKnown RBP12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 UNC119Q13432 240 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 GFOD2Q3B7J2 385 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 ZNF260Q3ZCT1 412 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 PHB2Q99623 299 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 TREM1Q9NP99 234 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 ABI3Q9P2A4 366 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 DNAJC13O75165 2243 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 MSGN1A6NI15 193 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 EFSO43281 561 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 SPP1P10451 314 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 CBX5P45973 191 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 GALNTL5Q7Z4T8 443 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 COMMD2Q86X83 199 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 ZSCAN4Q8NAM6 433 aaPredicted RBP12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 MARCH1Q8TCQ1 289 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 KCNE4Q8WWG9 221 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 PRRT1Q99946 306 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 FAM173AQ9BQD7 235 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 RNF126Q9BV68 326 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 PBOV1Q9GZY1 135 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 SLCO5A1Q9H2Y9 848 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 CHMP1AQ9HD42 196 aaPredicted RBP12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 CYTL1Q9NRR1 136 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 FAM206AQ9NX38 181 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 SLC5A6Q9Y289 635 aa12.85□□□□□ -0.35
PPP4R3A-201ENST00000554308 ZNF878C9JN71 531 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 CRHP06850 196 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 MAGEA5P43359 124 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 FGGYQ96C11 551 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 FER1L6-AS2Q96M78 137 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 ULBP2Q9BZM5 246 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 TTRP02766 147 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 CD79AP11912 226 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 HLA-GP17693 338 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 FSTP19883 344 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 ANOS1P23352 680 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 PSMB6P28072 239 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 GNALP38405 381 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 MEF2DQ14814 521 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 MST1LQ2TV78 715 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 NKAPLQ5M9Q1 402 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 DHRS7BQ6IAN0 325 aaPredicted RBP12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 ZNF704Q6ZNC4 412 aaPredicted RBP12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 LYPD6Q86Y78 171 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 TMEM123Q8N131 208 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 OR52N4Q8NGI2 321 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 OR10R2Q8NGX6 335 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 OR51E1Q8TCB6 317 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 ABHD3Q8WU67 409 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 SLC2A8Q9NY64 477 aa12.84□□□□□ -0.35
PPP4R3A-201ENST00000554308 NCOA6Q14686 2063 aaPredicted RBP12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 SYT7O43581 403 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 CRYBA1P05813 215 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 PI3P19957 117 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 GFRA1P56159 465 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 TMEM244Q5VVB8 128 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 NAA40Q86UY6 237 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 OR2V1Q8NHB1 315 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 PRR33A8MZF0 331 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 F5H5K5 113 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 F8VVB4 439 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 F8VWA3 439 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 DHHO43323 396 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 SSX5O60225 188 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 ADAP1O75689 374 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 FARS2O95363 451 aaKnown RBP12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 ISG15P05161 165 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 PLGLB1Q02325 96 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 C1orf100Q5SVJ3 147 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 BAP18Q8IXM2 172 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 LILRB1Q8NHL6 650 aaPredicted RBP12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 RXFP4Q8TDU9 374 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 THRSPQ92748 146 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 SPACA5Q96QH8 159 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 NICN1Q9BSH3 213 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 SOX7Q9BT81 388 aa12.83□□□□□ -0.36
PPP4R3A-201ENST00000554308 TTTY12Q9BZ98 90 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms