RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 CDS1Q92903 461 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 SLC38A4Q969I6 547 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 SLAMF9Q96A28 289 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 CREB3L1Q96BA8 519 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 NXNL1Q96CM4 212 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 FAF2Q96CS3 445 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 CMTM5Q96DZ9 223 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 CPXM1Q96SM3 734 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 NPY6RQ99463 290 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 EGFL8Q99944 293 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 CITED1Q99966 193 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 KLHDC3Q9BQ90 382 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 AIF1LQ9BQI0 150 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 C7orf50Q9BRJ6 194 aaKnown RBP4.04□□□□□ -1.76
ATXN3-218ENST00000553309 DPH7Q9BTV6 452 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 NDUFAF3Q9BU61 184 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 PRRG3Q9BZD7 231 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 NKX6-2Q9C056 277 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-218ENST00000553309 SRRQ9GZT4 340 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 COMMD4Q9H0A8 199 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 DSN1Q9H410 356 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 RNF122Q9H9V4 155 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 ABCB9Q9NP78 766 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 ACP6Q9NPH0 428 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 POLE4Q9NR33 117 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 OR12D3Q9UGF7 316 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 CHRNA9Q9UGM1 479 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 RIMS3Q9UJD0 308 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 LEF1Q9UJU2 399 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-218ENST00000553309 DKKL1Q9UK85 242 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 NEU3Q9UQ49 428 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 TRAPPC4Q9Y296 219 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 FBXO7Q9Y3I1 522 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 U3KQV3 271 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 DNAJC13O75165 2243 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 CPAMD8Q8IZJ3 1885 aa4.04□□□□□ -1.76
ATXN3-218ENST00000553309 LOC100509620A0A075B734 347 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 CXorf51AA0A1B0GTR3 108 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 A0A1W2PPV4 95 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 NKX6-3A6NJ46 265 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 NPIPA3F8WFD2 350 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 M0R143 59 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 SLC33A1O00400 549 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-218ENST00000553309 SRPX2O60687 465 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-218ENST00000553309 B4GALT2O60909 372 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 WBP4O75554 376 aaKnown RBP4.03□□□□□ -1.76
ATXN3-218ENST00000553309 ATG12O94817 140 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 IFNA21P01568 189 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 TSPAN19P0C672 248 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 SAT1P21673 171 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 IL12BP29460 328 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 PMELP40967 661 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 MAGEA3P43357 314 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 EFNA3P52797 238 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 NME5P56597 212 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 VSX2P58304 361 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-218ENST00000553309 DNAJB13P59910 316 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 RPS20P60866 119 aaKnown RBP4.03□□□□□ -1.76
ATXN3-218ENST00000553309 CDC42P60953 191 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 EMX2Q04743 252 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 PTK6Q13882 451 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 GK3PQ14409 553 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 PCLAFQ15004 111 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 RPS6KA1Q15418 735 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 MEP1BQ16820 701 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 CBWD6Q4V339 395 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 NHSL2Q5HYW2 709 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 CBWD3Q5JTY5 395 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 SPANXN2Q5MJ10 180 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 LCE3CQ5T5A8 94 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 CARD17Q5XLA6 110 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 TXNRD3NBQ6F5E7 133 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 HAGHLQ6PII5 290 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-218ENST00000553309 HSDL2Q6YN16 418 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 COX15Q7KZN9 410 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 STRADAQ7RTN6 431 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 GRINAQ7Z429 371 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 NAA40Q86UY6 237 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 HOGA1Q86XE5 327 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 LYG1Q8N1E2 194 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 NPEPL1Q8NDH3 523 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 RNASE8Q8TDE3 154 aaKnown RBP4.03□□□□□ -1.76
ATXN3-218ENST00000553309 CYGBQ8WWM9 190 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 CACNG8Q8WXS5 425 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 RNASE6Q93091 150 aaKnown RBP4.03□□□□□ -1.76
ATXN3-218ENST00000553309 TM4SF18Q96CE8 201 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 CMTM7Q96FZ5 175 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 SAMD8Q96LT4 415 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 PRRC1Q96M27 445 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 CNN2Q99439 309 aaKnown RBP4.03□□□□□ -1.76
ATXN3-218ENST00000553309 CMSS1Q9BQ75 279 aaKnown RBP4.03□□□□□ -1.76
ATXN3-218ENST00000553309 PIGQQ9BRB3 760 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 URM1Q9BTM9 101 aaKnown RBP4.03□□□□□ -1.76
ATXN3-218ENST00000553309 ZNF426Q9BUY5 554 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 NAA50Q9GZZ1 169 aaKnown RBP4.03□□□□□ -1.76
ATXN3-218ENST00000553309 FN3KQ9H479 309 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 AUNIPQ9H7T9 357 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 FAM60AQ9NP50 221 aa4.03□□□□□ -1.76
ATXN3-218ENST00000553309 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.03□□□□□ -1.76
ATXN3-218ENST00000553309 MRPL22Q9NWU5 206 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms