RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 DDIT4Q9NX09 232 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 CYB5R1Q9UHQ9 305 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 YTHDF2Q9Y5A9 579 aaKnown RBP3.14□□□□□ -1.91
SCFD1-209ENST00000553280 LRP4O75096 1905 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 BRCA1P38398 1863 aaKnown RBP3.13□□□□□ -1.91
SCFD1-209ENST00000553280 IGHV6-1A0A0B4J1U7 121 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 PLPP3O14495 311 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 NDUFS5O43920 106 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 LDOC1O95751 146 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-209ENST00000553280 IGKV1D-16P01601 117 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 CD74P04233 296 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 ADRA2AP08913 450 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 C1GALT1C1LP0DN25 315 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 HSPD1P10809 573 aaKnown RBP3.13□□□□□ -1.91
SCFD1-209ENST00000553280 LRRC63Q05C16 580 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 STX4Q12846 297 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 FBXL19-AS1Q494R0 122 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 CLEC6AQ6EIG7 209 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 ZFP1Q6P2D0 407 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 COMTD1Q86VU5 262 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 SLC34A3Q8N130 599 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 ANGPTL6Q8NI99 470 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 LINC01560Q8TB33 94 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 TMED9Q9BVK6 235 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 SLC38A1Q9H2H9 487 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 PLEKHF2Q9H8W4 249 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 TMBIM4Q9HC24 238 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 C12orf4Q9NQ89 552 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 CD300AQ9UGN4 299 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 KLK12Q9UKR0 248 aa3.13□□□□□ -1.91
SCFD1-209ENST00000553280 NPHP4O75161 1426 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-209ENST00000553280 ENSAO43768 121 aaKnown RBP3.12□□□□□ -1.91
SCFD1-209ENST00000553280 PLIN3O60664 434 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 GATBO75879 557 aaKnown RBP3.12□□□□□ -1.91
SCFD1-209ENST00000553280 IGLV3-25P01717 112 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 GIMD1P0DJR0 217 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 ME2P23368 584 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 PSMB5P28074 263 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 OR2B6P58173 313 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 TEX30Q5JUR7 227 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 ZNF470Q6ECI4 717 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 ERO1BQ86YB8 467 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 GAPTQ8N292 157 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 OR51Q1Q8NH59 317 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 RBMXL1Q96E39 390 aaKnown RBP3.12□□□□□ -1.91
SCFD1-209ENST00000553280 ZNF396Q96N95 335 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-209ENST00000553280 RILPQ96NA2 401 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 ZFP3Q96NJ6 502 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 SERPINB11Q96P15 392 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 CYTH2Q99418 400 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 TBL1YQ9BQ87 522 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 CHMP4BQ9H444 224 aaKnown RBP3.12□□□□□ -1.91
SCFD1-209ENST00000553280 ANXA10Q9UJ72 324 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 FARSAQ9Y285 508 aaKnown RBP3.12□□□□□ -1.91
SCFD1-209ENST00000553280 LRRC42Q9Y546 428 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 ORC6Q9Y5N6 252 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
SCFD1-209ENST00000553280 IGKV6-21A0A0C4DH24 114 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 TCAPO15273 167 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 BRI3O95415 125 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 IL3RAP26951 378 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 PRSS3P35030 304 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 PSMB2P49721 201 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 KRTAP12-2P59991 146 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 UBE2KP61086 200 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 AP1ARQ63HQ0 302 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 OR4M2Q8NGB6 313 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 C17orf50Q8WW18 174 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 SLC25A46Q96AG3 418 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 S100PBPQ96BU1 408 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 ZNF285Q96NJ3 590 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 METTL26Q96S19 204 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 NUDT9Q9BW91 350 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 BBS2Q9BXC9 721 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 NRBP2Q9NSY0 501 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 ENOPH1Q9UHY7 261 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 RFNGQ9Y644 331 aa3.11□□□□□ -1.91
SCFD1-209ENST00000553280 USP42Q9H9J4 1324 aaKnown RBP3.11□□□□□ -1.91
SCFD1-209ENST00000553280 BET1O15155 118 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 CETN3O15182 167 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 CCNE2O96020 404 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 ZNF806P0C7X5 589 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 LINC00869P0C866 280 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 IL1RNP18510 177 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 MAGEA3P43357 314 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 PPP1CAP62136 330 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 LAMTOR4Q0VGL1 99 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 PTGES3Q15185 160 aaKnown RBP3.1□□□□□ -1.91
SCFD1-209ENST00000553280 LINC00483Q53H64 154 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 IDNKQ5T6J7 187 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 FAM71E1Q6IPT2 247 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 ERICH5Q6P6B1 374 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 TIFABQ6ZNK6 161 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 Q6ZT83 130 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 TMEM25Q86YD3 366 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 SELENOHQ8IZQ5 122 aaKnown RBP3.1□□□□□ -1.91
SCFD1-209ENST00000553280 SYNPRQ8TBG9 265 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 GTF2H4Q92759 462 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 TRNT1Q96Q11 434 aaKnown RBP3.1□□□□□ -1.91
SCFD1-209ENST00000553280 OR2M4Q96R27 311 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms