RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 ATP6V1B1P15313 513 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 GLRA1P23415 457 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 HTR1FP30939 366 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 GABRA2P47869 451 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 GNG3P63215 75 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 ZSCAN26Q16670 478 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 C11orf91Q3C1V1 193 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 CDONQ4KMG0 1287 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 ATPAF1Q5TC12 328 aaPredicted RBP13.1□□□□□ -0.31
CDK4-215ENST00000553237 PLCXD3Q63HM9 321 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 Q6YL49 198 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 VMO1Q7Z5L0 202 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 LY6G5BQ8NDX9 201 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 OR51G2Q8NGK0 314 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 GAFA1Q96PS6 74 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 MBOAT4Q96T53 435 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 TBX5Q99593 518 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 UNKLQ9H9P5 680 aaKnown RBP13.1□□□□□ -0.31
CDK4-215ENST00000553237 NOX4Q9NPH5 578 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 ACOXLQ9NUZ1 547 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 NLKQ9UBE8 527 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 WARS2Q9UGM6 360 aaKnown RBP13.1□□□□□ -0.31
CDK4-215ENST00000553237 FAM181BA6NEQ2 426 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 A6NIN4 97 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 NKX6-3A6NJ46 265 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 ZNF670-ZNF695F2Z2N8 137 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 SRSF10O75494 262 aaKnown RBP13.09□□□□□ -0.31
CDK4-215ENST00000553237 APOL3O95236 402 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 TTRP02766 147 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 MELTFP08582 738 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 DLX1P56177 255 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 DGUOKQ16854 277 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 HAGHLQ6PII5 290 aaPredicted RBP13.09□□□□□ -0.31
CDK4-215ENST00000553237 ZNF788Q6ZQV5 615 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 KRT74Q7RTS7 529 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 OR5A2Q8NGI9 324 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 SGMS2Q8NHU3 365 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 ANGPTL6Q8NI99 470 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 TRUB1Q8WWH5 349 aaKnown RBP13.09□□□□□ -0.31
CDK4-215ENST00000553237 TMIGD2Q96BF3 282 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 MNTQ99583 582 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 DCTN5Q9BTE1 182 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 CLN6Q9NWW5 311 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 MRM2Q9UI43 246 aaKnown RBP13.09□□□□□ -0.31
CDK4-215ENST00000553237 ENPP5Q9UJA9 477 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 OR52A1Q9UKL2 312 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 KPTNQ9Y664 436 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 R4GMQ9 66 aa13.09□□□□□ -0.31
CDK4-215ENST00000553237 A0A0U1RQK1 487 aa13.08□□□□□ -0.32
CDK4-215ENST00000553237 OR2AT4A6NND4 320 aa13.08□□□□□ -0.32
CDK4-215ENST00000553237 GPR37O15354 613 aa13.08□□□□□ -0.32
CDK4-215ENST00000553237 MTRF1O75570 445 aaKnown RBP13.08□□□□□ -0.32
CDK4-215ENST00000553237 DHRS3O75911 302 aa13.08□□□□□ -0.32
CDK4-215ENST00000553237 RPP14O95059 124 aaKnown RBP13.08□□□□□ -0.32
CDK4-215ENST00000553237 NRASP01111 189 aa13.08□□□□□ -0.32
CDK4-215ENST00000553237 NDUFB7P17568 137 aa13.08□□□□□ -0.32
CDK4-215ENST00000553237 MDKP21741 143 aaPredicted RBP13.08□□□□□ -0.32
CDK4-215ENST00000553237 IL13RA1P78552 427 aa13.08□□□□□ -0.32
CDK4-215ENST00000553237 BCL2L15Q5TBC7 163 aa13.08□□□□□ -0.32
CDK4-215ENST00000553237 FIP1L1Q6UN15 594 aaKnown RBP13.08□□□□□ -0.32
CDK4-215ENST00000553237 SSX6Q7RTT6 188 aa13.08□□□□□ -0.32
CDK4-215ENST00000553237 ELMOD2Q8IZ81 293 aa13.08□□□□□ -0.32
CDK4-215ENST00000553237 ZNF671Q8TAW3 534 aa13.08□□□□□ -0.32
CDK4-215ENST00000553237 RFKQ969G6 155 aa13.08□□□□□ -0.32
CDK4-215ENST00000553237 MED30Q96HR3 178 aa13.08□□□□□ -0.32
CDK4-215ENST00000553237 CHIAQ9BZP6 476 aa13.08□□□□□ -0.32
CDK4-215ENST00000553237 DNTTIP1Q9H147 329 aa13.08□□□□□ -0.32
CDK4-215ENST00000553237 SIRT7Q9NRC8 400 aa13.08□□□□□ -0.32
CDK4-215ENST00000553237 GPR173Q9NS66 373 aa13.08□□□□□ -0.32
CDK4-215ENST00000553237 SLC25A10Q9UBX3 287 aaPredicted RBP13.08□□□□□ -0.32
CDK4-215ENST00000553237 SLC22A13Q9Y226 551 aa13.08□□□□□ -0.32
CDK4-215ENST00000553237 GMPPBQ9Y5P6 360 aa13.08□□□□□ -0.32
CDK4-215ENST00000553237 A0A1B0GTI1 187 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 A0A1B0GVI7 797 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 A0A1W2PRD5 423 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 A0A1W2PRF3 423 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 A0A1W2PRM7 423 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 OR5B21A6NL26 309 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 SIGLEC5O15389 551 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 SPRY1O43609 319 aaPredicted RBP13.07□□□□□ -0.32
CDK4-215ENST00000553237 ENTPD6O75354 484 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 ACAA1P09110 424 aaPredicted RBP13.07□□□□□ -0.32
CDK4-215ENST00000553237 PSG2P11465 335 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 ATP6V1E1P36543 226 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 SNRPGP62308 76 aaKnown RBP13.07□□□□□ -0.32
CDK4-215ENST00000553237 GABPB1Q06547 395 aaPredicted RBP13.07□□□□□ -0.32
CDK4-215ENST00000553237 EGR3Q06889 387 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 TMED1Q13445 227 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 RCN1Q15293 331 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 ODF4Q2M2E3 257 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 ZNF684Q5T5D7 378 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 ZBTB37Q5TC79 503 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 SHISA2Q6UWI4 295 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 CMTM4Q8IZR5 234 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 PIP4P2Q8N4L2 257 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 YIPF7Q8N8F6 280 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 AQP3Q92482 292 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 ZNF488Q96MN9 340 aa13.07□□□□□ -0.32
CDK4-215ENST00000553237 ELL3Q9HB65 397 aaPredicted RBP13.07□□□□□ -0.32
CDK4-215ENST00000553237 SNX5Q9Y5X3 404 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms