RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 MMP26Q9NRE1 261 aa12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 GPR173Q9NS66 373 aa12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 ERVK-18Q9QC07 812 aa12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 CTSZQ9UBR2 303 aa12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 IGHV2-70DA0A0C4DH43 119 aa12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 AVPP01185 164 aa12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 GYPAP02724 150 aa12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 NANOS3P60323 173 aaKnown RBP12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 PAX2Q02962 417 aa12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 SMN1Q16637 294 aaKnown RBP12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 C11orf91Q3C1V1 193 aa12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 HAGHLQ6PII5 290 aaPredicted RBP12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 BTNL3Q6UXE8 466 aa12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 C1orf229Q6ZS94 237 aaPredicted RBP12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 LHFPL3Q86UP9 236 aa12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 ZNF573Q86YE8 665 aa12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 C8orf59Q8N0T1 100 aaPredicted RBP12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 ZNF671Q8TAW3 534 aa12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 CNIH3Q8TBE1 160 aa12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 RAB40AQ8WXH6 277 aa12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 AQP3Q92482 292 aa12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 DNTTIP1Q9H147 329 aa12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 FRRS1LQ9P0K9 344 aa12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 OPN4Q9UHM6 478 aa12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 WNK2Q9Y3S1 2297 aa12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 MXRA5Q9NR99 2828 aa12.84□□□□□ -0.35
PRPF40B-211ENST00000551063 LOC105371242A0A075B767 164 aa12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 IGHV3OR15-7A0A075B7D8 119 aa12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 PQLC2LA1A4F0 135 aa12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 J3QT63 122 aa12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 RPSAP08865 295 aaKnown RBP12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 PAX8Q06710 450 aa12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 ALKBH1Q13686 389 aaKnown RBP12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 ATPAF1Q5TC12 328 aaPredicted RBP12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 CD276Q5ZPR3 534 aa12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 STUMQ69YW2 141 aa12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 SLC36A1Q7Z2H8 476 aa12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 NANPQ8TBE9 248 aa12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 PP6455Q8WZ26 134 aa12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 MRI1Q9BV20 369 aa12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 DNAJB11Q9UBS4 358 aa12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 NKX1-2Q9UD57 310 aaPredicted RBP12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 METRNQ9UJH8 293 aa12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 HHLA2Q9UM44 414 aa12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 DIMT1Q9UNQ2 313 aaKnown RBP12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 POLDIP2Q9Y2S7 368 aa12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 AUP1Q9Y679 476 aa12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 STAB1Q9NY15 2570 aa12.83□□□□□ -0.36
PRPF40B-211ENST00000551063 CUBNO60494 3623 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 OR4C45A6NMZ5 311 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 H0YJX3 145 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 TMPRSS2O15393 492 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 AKR7A2O43488 359 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 ENSAO43768 121 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 RHBDL1O75783 438 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 SERPINA3P01011 423 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 FSHBP01225 129 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 CCDC159P0C7I6 412 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 LIMS3P0CW19 117 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 LIMS4P0CW20 117 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 PPIAL4GP0DN37 164 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 GLRA1P23415 457 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 MPZP25189 248 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 HAAOP46952 286 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 TGM4P49221 684 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 GBX2P52951 348 aaPredicted RBP12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 CNN3Q15417 329 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 DMRTC1Q5HYR2 192 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 RDH10Q8IZV5 341 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 FBLIM1Q8WUP2 373 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 WDR13Q9H1Z4 485 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 ISG20L2Q9H9L3 353 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 SMURF1Q9HCE7 757 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 NLKQ9UBE8 527 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 SLC7A11Q9UPY5 501 aa12.82□□□□□ -0.36
PRPF40B-211ENST00000551063 KIR2DS1A0A191URI9 304 aa12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 A6NIN4 97 aa12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 NKX6-3A6NJ46 265 aa12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 TMEM212A6NML5 194 aa12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 C22orf46C9J442 243 aa12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 H3BSH0 61 aa12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 PIPP12273 146 aaPredicted RBP12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 MYL12AP19105 171 aa12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 FUT6P51993 359 aa12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 MED21Q13503 144 aa12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 UTS2BQ765I0 119 aa12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 ZNF676Q8N7Q3 588 aa12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 POC1AQ8NBT0 407 aa12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 TFAP2CQ92754 450 aa12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 TMIGD2Q96BF3 282 aa12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 SEH1LQ96EE3 360 aa12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 NUDT16L1Q9BRJ7 211 aaKnown RBP12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 PKIBQ9C010 78 aa12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 RASL12Q9NYN1 266 aa12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 CAB39Q9Y376 341 aaPredicted RBP12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 EXOSC1Q9Y3B2 195 aaKnown RBP12.81□□□□□ -0.36
PRPF40B-211ENST00000551063 EFCAB10A6NFE3 127 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 DVL1O14640 695 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 GPR37O15354 613 aa12.8□□□□□ -0.36
PRPF40B-211ENST00000551063 NOS1APO75052 506 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms