RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 IGHV3-66A0A0C4DH42 116 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 SERTM2A0A1B0GWG4 89 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 C10orf142B7Z368 130 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 C19orf84I3L1E1 186 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 ANGPTL7O43827 346 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 HUS1O60921 280 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 CTAG2O75638 210 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 ACSM4P0C7M7 580 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 CCNB1P14635 433 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 GTF2E2P29084 291 aaKnown RBP3.05□□□□□ -1.92
LIMA1-205ENST00000550592 MAS1LP35410 378 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 SPAM1P38567 509 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 MRPL19P49406 292 aaKnown RBP3.05□□□□□ -1.92
LIMA1-205ENST00000550592 MNAT1P51948 309 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 STXBP1P61764 594 aaKnown RBP3.05□□□□□ -1.92
LIMA1-205ENST00000550592 SARNPP82979 210 aaKnown RBP3.05□□□□□ -1.92
LIMA1-205ENST00000550592 NCCRP1Q6ZVX7 275 aaPredicted RBP3.05□□□□□ -1.92
LIMA1-205ENST00000550592 SAXO1Q8IYX7 474 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 GABRG1Q8N1C3 465 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 C15orf56Q8N910 161 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 WFDC11Q8NEX6 87 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 NOXO1Q8NFA2 376 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 SEH1LQ96EE3 360 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 DNAJC1Q96KC8 554 aaKnown RBP3.05□□□□□ -1.92
LIMA1-205ENST00000550592 BPIFA3Q9BQP9 254 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 CHAC1Q9BUX1 264 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 CALN1Q9BXU9 219 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 NOX3Q9HBY0 568 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 ISYNA1Q9NPH2 558 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 LYARQ9NX58 379 aaKnown RBP3.05□□□□□ -1.92
LIMA1-205ENST00000550592 SLC39A1Q9NY26 324 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 MTCH1Q9NZJ7 389 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 CCDC59Q9P031 241 aaKnown RBP3.05□□□□□ -1.92
LIMA1-205ENST00000550592 KLK12Q9UKR0 248 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 SLC17A4Q9Y2C5 497 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 KCNE3Q9Y6H6 103 aa3.05□□□□□ -1.92
LIMA1-205ENST00000550592 TTC41PQ6P2S7 1318 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 LYRM9A8MSI8 78 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 ANKRD63C9JTQ0 380 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 NUPL2O15504 423 aaKnown RBP3.04□□□□□ -1.92
LIMA1-205ENST00000550592 ZW10O43264 779 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 CLDN11O75508 207 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 PLEKHA8P1O95397 391 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 FABP3P05413 133 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 SERPINE2P07093 398 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 TLX1NBP0CAT3 122 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 RAB3BP20337 219 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 STOMP27105 288 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 DCKP27707 260 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 CEACAM6P40199 344 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 ATP5OP48047 213 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 CD151P48509 253 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 PPOXP50336 477 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 ZNF138P52744 262 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 SPAG1Q07617 926 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 C16orf72Q14CZ0 275 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 OR7A5Q15622 319 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 ZNF726P1Q15940 193 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 THEM4Q5T1C6 240 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 TTC23LQ6PF05 361 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 TIFABQ6ZNK6 161 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 Q6ZSR6 202 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 FAM92BQ6ZTR7 304 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 EIF3MQ7L2H7 374 aaKnown RBP3.04□□□□□ -1.92
LIMA1-205ENST00000550592 SSX9Q7RTT3 188 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 CMC1Q7Z7K0 106 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 PQLC3Q8N755 202 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 CAPSLQ8WWF8 208 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 GSDMAQ96QA5 445 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 OR5B12Q96R08 314 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 ACBD6Q9BR61 282 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 PARP12Q9H0J9 701 aaKnown RBP3.04□□□□□ -1.92
LIMA1-205ENST00000550592 RPP21Q9H633 154 aaKnown RBP3.04□□□□□ -1.92
LIMA1-205ENST00000550592 AUNIPQ9H7T9 357 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 RRAGDQ9NQL2 400 aaPredicted RBP3.04□□□□□ -1.92
LIMA1-205ENST00000550592 STMN3Q9NZ72 180 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 PTTG3PQ9NZH4 202 aa3.04□□□□□ -1.92
LIMA1-205ENST00000550592 SEC16AO15027 2179 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 IGHV3-74A0A0B4J1X5 117 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 IGHV5-51A0A0C4DH38 117 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 SPTY2D1-AS1A0A0U1RR47 76 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 INS-IGF2F8WCM5 200 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 WRBO00258 174 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 COCHO43405 550 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 ERCC1P07992 297 aaPredicted RBP3.03□□□□□ -1.92
LIMA1-205ENST00000550592 FGF4P08620 206 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 OR5H8P0DN80 308 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 PRPS2P11908 318 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 MAGP20916 626 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 F2RP25116 425 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 RND2P52198 227 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 DEFA6Q01524 100 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 IL18Q14116 193 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 GINS1Q14691 196 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 CST6Q15828 149 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 ZBTB6Q15916 424 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 DEFB116Q30KQ4 102 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 TMEM53Q6P2H8 277 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 SGMS2Q8NHU3 365 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 LYPD6BQ8NI32 183 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms