RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 ECH1Q13011 328 aa12.39□□□□□ -0.43
RAPGEF3-218ENST00000548919 CDCP2Q5VXM1 449 aa12.39□□□□□ -0.43
RAPGEF3-218ENST00000548919 EIF5AL1Q6IS14 154 aaKnown RBP12.39□□□□□ -0.43
RAPGEF3-218ENST00000548919 OR6X1Q8NH79 312 aa12.39□□□□□ -0.43
RAPGEF3-218ENST00000548919 FBXO17Q96EF6 278 aa12.39□□□□□ -0.43
RAPGEF3-218ENST00000548919 LIME1Q9H400 295 aa12.39□□□□□ -0.43
RAPGEF3-218ENST00000548919 IFT22Q9H7X7 185 aa12.39□□□□□ -0.43
RAPGEF3-218ENST00000548919 ZNF160Q9HCG1 818 aa12.39□□□□□ -0.43
RAPGEF3-218ENST00000548919 C1orf123Q9NWV4 160 aa12.39□□□□□ -0.43
RAPGEF3-218ENST00000548919 MEMO1Q9Y316 297 aa12.39□□□□□ -0.43
RAPGEF3-218ENST00000548919 PQLC2LA1A4F0 135 aa12.39□□□□□ -0.43
RAPGEF3-218ENST00000548919 GLAP06280 429 aa12.39□□□□□ -0.43
RAPGEF3-218ENST00000548919 DBHP09172 617 aa12.39□□□□□ -0.43
RAPGEF3-218ENST00000548919 ADH6P28332 368 aa12.39□□□□□ -0.43
RAPGEF3-218ENST00000548919 PHYHD1Q5SRE7 291 aa12.39□□□□□ -0.43
RAPGEF3-218ENST00000548919 SULF2Q8IWU5 870 aa12.39□□□□□ -0.43
RAPGEF3-218ENST00000548919 FNDC9Q8TBE3 224 aa12.39□□□□□ -0.43
RAPGEF3-218ENST00000548919 MED19A0JLT2 244 aaPredicted RBP12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 TAAR5O14804 337 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 CPT2P23786 658 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 FHITP49789 147 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 NXPH1P58417 271 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 PRAMEF20Q5VT98 475 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 GGNBP1Q5YKI7 109 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 S100A13Q99584 98 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 WDR77Q9BQA1 342 aaPredicted RBP12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 LMAN1LQ9HAT1 526 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 PLEKHJ1Q9NW61 149 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 CACFD1Q9UGQ2 172 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 ATPIF1Q9UII2 106 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 PIGLQ9Y2B2 252 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 AMDHD2Q9Y303 409 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 IGHV3-15A0A0B4J1V0 119 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 ETV2O00321 342 aaPredicted RBP12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 NME2P1O60361 137 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 DEDDO75618 318 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 NAT2P11245 290 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 PRF1P14222 555 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 DAOP14920 347 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 SWI5Q1ZZU3 235 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 RBMS3Q6XE24 437 aaKnown RBP12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 SLC25A45Q8N413 288 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 NAXEQ8NCW5 288 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 OXGR1Q96P68 337 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 PRRX2Q99811 253 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 NAA11Q9BSU3 229 aaPredicted RBP12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 C20orf24Q9BUV8 137 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 RPS10P5Q9NQ39 176 aa12.38□□□□□ -0.43
RAPGEF3-218ENST00000548919 ANGPTL7O43827 346 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 OPRM1P35372 400 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 DVL1P1P54792 670 aaPredicted RBP12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 GRB2P62993 217 aaKnown RBP12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 EIF5AP63241 154 aaKnown RBP12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 CHAF1BQ13112 559 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 HIST3H3Q16695 136 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 NKAIN1Q4KMZ8 207 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 TSPO2Q5TGU0 170 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 BRICD5Q6PL45 260 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 DYRK2Q92630 601 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 TOMM40LQ969M1 308 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 ISOC2Q96AB3 205 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 PARP11Q9NR21 331 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 SDK2Q58EX2 2172 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 ACAA1P09110 424 aaPredicted RBP12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 TMEM225BP0DP42 221 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 HGFACQ04756 655 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 RSPO1Q2MKA7 263 aaPredicted RBP12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 SLC25A53Q5H9E4 307 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 SGPP2Q8IWX5 399 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 OR2M3Q8NG83 312 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 FAAP24Q9BTP7 215 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 SMCO4Q9NRQ5 59 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 MYOTQ9UBF9 498 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 ADAMTS20P59510 1910 aa12.37□□□□□ -0.43
RAPGEF3-218ENST00000548919 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 SERPINE3A8MV23 424 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 XRCC2O43543 280 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 C1QL1O75973 258 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 DIRAS3O95661 229 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 THBS4P35443 961 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 ZNF616Q08AN1 781 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 SMCO1Q147U7 214 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 FAM189A2Q15884 450 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 RHBDD2Q6NTF9 364 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 SKA3Q8IX90 412 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 C20orf196Q8IYI0 205 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 IP6K3Q96PC2 410 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 TGIF2Q9GZN2 237 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 PADI1Q9ULC6 663 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 A0A1B0GV50 99 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 DHRS3O75911 302 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 JTBO76095 146 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 SNRNP70P08621 437 aaKnown RBP12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 GLB1P16278 677 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 ZNF84P51523 738 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 MIDNQ504T8 468 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 SLC16A13Q7RTY0 426 aa12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.36□□□□□ -0.43
RAPGEF3-218ENST00000548919 WDSUB1Q8N9V3 476 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms