RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 CLEC4MQ9H2X3 399 aaPredicted RBP13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 PPP1R3EQ9H7J1 279 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 CNTD2Q9H8S5 307 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 POLDIP2Q9Y2S7 368 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 PKDREJQ9NTG1 2253 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 ICE1Q9Y2F5 2266 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 A0A075B6Q4 140 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 F5H5P2 479 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 H0YL77 283 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 SPRY3O43610 288 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 IGHV1-46P01743 117 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 TMEM225BP0DP42 221 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 CALCBP10092 127 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 TNFRSF1AP19438 455 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 THBS2P35442 1172 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 HAAOP46952 286 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 CAV3P56539 151 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 TNFAIP6P98066 277 aaPredicted RBP13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 GPR176Q14439 515 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 DMRTC1Q5HYR2 192 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 HES5Q5TA89 166 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 FAM166AQ6J272 317 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 ANGPTL5Q86XS5 388 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 MKXQ8IYA7 352 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 PXT1Q8NFP0 134 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 MCFD2Q8NI22 146 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 TNFAIP8L1Q8WVP5 186 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 ERGIC1Q969X5 290 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 SPACA5Q96QH8 159 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 BARHL1Q9BZE3 327 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 SLIRPQ9GZT3 109 aaKnown RBP13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 MMP27Q9H306 513 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 OR51I2Q9H344 312 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 UBTD1Q9HAC8 227 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 PLEKHB1Q9UF11 243 aaPredicted RBP13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 MRPS28Q9Y2Q9 187 aaKnown RBP13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 ADGRG4Q8IZF6 3080 aa13.46□□□□□ -0.25
TRAFD1-203ENST00000547063 IGKV1-27A0A075B6S5 117 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 J3QT63 122 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 ZNF780AO75290 641 aaPredicted RBP13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 PTBP3O95758 552 aaKnown RBP13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 BPNT1O95861 308 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 DANCRP0C864 163 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 NAT2P11245 290 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 ARSBP15848 533 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 GATA4P43694 442 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 POU3F4P49335 361 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 IL24Q13007 206 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 PDZK1IP1Q13113 114 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 TESK1Q15569 626 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 FAM189A2Q15884 450 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 AWAT2Q6E213 333 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 TMEM200AQ86VY9 491 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 TBC1D15Q8TC07 691 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 FAM3DQ96BQ1 224 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 MEGF10Q96KG7 1140 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 OR2V2Q96R30 315 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 METTL9Q9H1A3 318 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 LIN7BQ9HAP6 207 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 RHOFQ9HBH0 211 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 DECR2Q9NUI1 292 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 ETV7Q9Y603 341 aa13.45□□□□□ -0.26
TRAFD1-203ENST00000547063 TPD52L2O43399 206 aaKnown RBP13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 SLC2A2P11168 524 aaPredicted RBP13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 MPZP25189 248 aa13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 SSTR2P30874 369 aa13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 OR3A4PP47883 348 aa13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 BMXP51813 675 aa13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 ZP1P60852 638 aa13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 ZNF154Q13106 437 aa13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 MAB21L1Q13394 359 aa13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 HAGHLQ6PII5 290 aaPredicted RBP13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 ASCL4Q6XD76 172 aa13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 OR4D6Q8NGJ1 314 aa13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 OR51F2Q8NH61 342 aa13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 KCNG3Q8TAE7 436 aa13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 GTF3AQ92664 365 aaKnown RBP13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 RFT1Q96AA3 541 aa13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 TRAF4Q9BUZ4 470 aaPredicted RBP13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 FGF23Q9GZV9 251 aaPredicted RBP13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 NXF2Q9GZY0 626 aaKnown RBP13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 RAB1BQ9H0U4 201 aa13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 CST11Q9H112 138 aa13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 TLNRD1Q9H1K6 362 aa13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 FN3KRPQ9HA64 309 aa13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 SPATA2Q9UM82 520 aa13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 HELZ2Q9BYK8 2649 aaKnown RBP13.44□□□□□ -0.26
TRAFD1-203ENST00000547063 LOC100289279A0A1B0GTE1 492 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 A0A1W2PPR1 153 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 A6NLC8 198 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 TRAPPC2LH3BP13 241 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 IFNL4K9M1U5 179 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 GRPP07492 148 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 ACAA1P09110 424 aaPredicted RBP13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 S100A5P33763 92 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 RSU1Q15404 277 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 C11orf71Q6IPW1 123 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 GLIPR1L1Q6UWM5 242 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 SLC25A26Q70HW3 274 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 OR2W3Q7Z3T1 314 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms