RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 DMRTC1Q5HYR2 192 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 AVPI1Q5T686 147 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 LIPKQ5VXJ0 399 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 HAGHLQ6PII5 290 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-213ENST00000546820 ZNF826PQ6ZT77 177 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 LHFPL2Q6ZUX7 228 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 WDR86Q86TI4 376 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 LRRC28Q86X40 367 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-213ENST00000546820 BOLLQ8N9W6 283 aaKnown RBP11.59□□□□□ -0.55
PTCH1-213ENST00000546820 OR13C9Q8NGT0 318 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 OR10Z1Q8NGY1 313 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 TRMT10AQ8TBZ6 339 aaKnown RBP11.59□□□□□ -0.55
PTCH1-213ENST00000546820 NPRL2Q8WTW4 380 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 RGP1Q92546 391 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-213ENST00000546820 RPL3LQ92901 407 aaKnown RBP11.59□□□□□ -0.55
PTCH1-213ENST00000546820 C18orf12Q96KH6 178 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 NR1H4Q96RI1 486 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-213ENST00000546820 TMED9Q9BVK6 235 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 VCX3AQ9NNX9 186 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 PCDHB10Q9UN67 800 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 POLDIP2Q9Y2S7 368 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 MAP1AP78559 2803 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-213ENST00000546820 TRAV38-1A0A0B4J264 116 aa11.58□□□□□ -0.56
PTCH1-213ENST00000546820 SMAD7O15105 426 aaKnown RBP11.58□□□□□ -0.56
PTCH1-213ENST00000546820 NDUFA2O43678 99 aa11.58□□□□□ -0.56
PTCH1-213ENST00000546820 CYB5AP00167 134 aa11.58□□□□□ -0.56
PTCH1-213ENST00000546820 LHBP01229 141 aa11.58□□□□□ -0.56
PTCH1-213ENST00000546820 HCKP08631 526 aa11.58□□□□□ -0.56
PTCH1-213ENST00000546820 CPT2P23786 658 aa11.58□□□□□ -0.56
PTCH1-213ENST00000546820 AZGP1P25311 298 aaKnown RBP11.58□□□□□ -0.56
PTCH1-213ENST00000546820 TGFBR2P37173 567 aa11.58□□□□□ -0.56
PTCH1-213ENST00000546820 RPS11P62280 158 aaKnown RBP eCLIP11.58□□□□□ -0.56
PTCH1-213ENST00000546820 TMEM155Q4W5P6 130 aa11.58□□□□□ -0.56
PTCH1-213ENST00000546820 ACSM3Q53FZ2 586 aa11.58□□□□□ -0.56
PTCH1-213ENST00000546820 UBE2UQ5VVX9 321 aa11.58□□□□□ -0.56
PTCH1-213ENST00000546820 WDR82Q6UXN9 313 aa11.58□□□□□ -0.56
PTCH1-213ENST00000546820 SPICQ8N5J4 248 aa11.58□□□□□ -0.56
PTCH1-213ENST00000546820 TSPAN14Q8NG11 270 aa11.58□□□□□ -0.56
PTCH1-213ENST00000546820 LRRC29Q8WV35 223 aa11.58□□□□□ -0.56
PTCH1-213ENST00000546820 AQP3Q92482 292 aa11.58□□□□□ -0.56
PTCH1-213ENST00000546820 OPALINQ96PE5 141 aa11.58□□□□□ -0.56
PTCH1-213ENST00000546820 GAL3ST1Q99999 423 aa11.58□□□□□ -0.56
PTCH1-213ENST00000546820 TMUB1Q9BVT8 246 aa11.58□□□□□ -0.56
PTCH1-213ENST00000546820 IGHV4-61A0A0C4DH41 118 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 IGKV1-9A0A0C4DH69 117 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 J3QT63 122 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 LGALS8O00214 317 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 GPX5O75715 221 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 IGHV2-70P01814 119 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 ACAA1P09110 424 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-213ENST00000546820 PCMT1P22061 227 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 PSMB9P28065 219 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 GABRA5P31644 462 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 IL24Q13007 206 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 MICBQ29980 383 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 UNQ9370/PRO34162Q6UXP9 181 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 CEACAM19Q7Z692 300 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 PHC2Q8IXK0 858 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 MKXQ8IYA7 352 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 GCSAMQ8N6F7 178 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 OR13C5Q8NGS8 318 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 PHYHIPQ92561 330 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 RAB39BQ96DA2 213 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 OR14A2Q96R54 314 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 PKIBQ9C010 78 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 FGF23Q9GZV9 251 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-213ENST00000546820 TMEM165Q9HC07 324 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 TMEM138Q9NPI0 162 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 DCAF16Q9NXF7 216 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 RASL12Q9NYN1 266 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 TAS2R4Q9NYW5 299 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 FOXJ3Q9UPW0 622 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 TANC2Q9HCD6 1990 aa11.57□□□□□ -0.56
PTCH1-213ENST00000546820 ITPR3Q14573 2671 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 TRBV5-7A0A0A0MS05 114 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 MEGF11A6BM72 1044 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 OOEPA6NGQ2 149 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 SRRM5B3KS81 715 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 AKR7A2O43488 359 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 ZNF205O95201 554 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 ALDOBP05062 364 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 INHBBP09529 407 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 MUC1P15941 1255 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-213ENST00000546820 MPZP25189 248 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 BDKRB2P30411 391 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 DOC2BQ14184 412 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 ZMYND11Q15326 602 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 SFRP4Q6FHJ7 346 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-213ENST00000546820 ANGPTL5Q86XS5 388 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 CIARTQ8N365 385 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-213ENST00000546820 DEFB108BQ8NET1 73 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 CLDND2Q8NHS1 167 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 TMEM203Q969S6 136 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 COX4I2Q96KJ9 171 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 DERL3Q96Q80 235 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 NARFLQ9H6Q4 476 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 METTL17Q9H7H0 456 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-213ENST00000546820 ZNF696Q9H7X3 374 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 TCF7L1Q9HCS4 588 aa11.56□□□□□ -0.56
PTCH1-213ENST00000546820 DNAJB11Q9UBS4 358 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms