RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 ADARB2-AS1A8MUL3 147 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 IQCF6A8MYZ5 107 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 NPFFO15130 113 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 MPZL2O60487 215 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 FAM20BO75063 409 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 WBP4O75554 376 aaKnown RBP7.55□□□□□ -1.2
SSH1-205ENST00000546812 FCN3O75636 299 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 HLA-DPB1P04440 258 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 DBHP09172 617 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 CD28P10747 220 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 DBTP11182 482 aaKnown RBP7.55□□□□□ -1.2
SSH1-205ENST00000546812 CD33P20138 364 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 HSPA13P48723 471 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 HCCSP53701 268 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 KRTAP10-11P60412 298 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 HOXA4Q00056 320 aaPredicted RBP7.55□□□□□ -1.2
SSH1-205ENST00000546812 DOC2BQ14184 412 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 SMN1Q16637 294 aaKnown RBP7.55□□□□□ -1.2
SSH1-205ENST00000546812 PCK2Q16822 640 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 SLC25A30Q5SVS4 291 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 MEDAGQ5VYS4 303 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 SFRP4Q6FHJ7 346 aaPredicted RBP7.55□□□□□ -1.2
SSH1-205ENST00000546812 SLC16A9Q7RTY1 509 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 SLC35F2Q8IXU6 374 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 GJC3Q8NFK1 279 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 OR5L1Q8NGL2 311 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 OR1F12Q8NHA8 337 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 RHOXF1Q8NHV9 184 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 TFAP2CQ92754 450 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 SLAMF6Q96DU3 332 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 TBX5Q99593 518 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 ATF6BQ99941 703 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 HDHD2Q9H0R4 259 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 PNRC2Q9NPJ4 139 aaKnown RBP7.55□□□□□ -1.2
SSH1-205ENST00000546812 PTTG3PQ9NZH4 202 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 RNF7Q9UBF6 113 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 RPUSD1Q9UJJ7 312 aaKnown RBP7.55□□□□□ -1.2
SSH1-205ENST00000546812 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.55□□□□□ -1.2
SSH1-205ENST00000546812 COPS3Q9UNS2 423 aa7.55□□□□□ -1.2
SSH1-205ENST00000546812 TRAV38-1A0A0B4J264 116 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 PRR32B1ATL7 298 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 ZNF878C9JN71 531 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 H3BUX3 64 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 DVL1O14640 695 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 CD200P41217 278 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 RGS6P49758 472 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 ISL1P61371 349 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 OR8B8Q15620 311 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 MPPED2Q15777 294 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 TEX30Q5JUR7 227 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 ZBTB37Q5TC79 503 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 ZNF454Q8N9F8 522 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 LY6G5BQ8NDX9 201 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 BHLHE23Q8NDY6 225 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 BEND2Q8NDZ0 799 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 OR10H4Q8NGA5 316 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 OTOSQ8NHW6 89 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 THEM6Q8WUY1 208 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 DMRTB1Q96MA1 342 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 Q96MT0 163 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 ZNF184Q99676 751 aaPredicted RBP7.54□□□□□ -1.2
SSH1-205ENST00000546812 COQ7Q99807 217 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 CITED2Q99967 270 aaPredicted RBP7.54□□□□□ -1.2
SSH1-205ENST00000546812 COPS4Q9BT78 406 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 ABHD6Q9BV23 337 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 YIPF3Q9GZM5 350 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 FAM234AQ9H0X4 552 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 AMBNQ9NP70 447 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 RAB18Q9NP72 206 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 TRIM36Q9NQ86 728 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 SIRT7Q9NRC8 400 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 CENPMQ9NSP4 180 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 UFSP2Q9NUQ7 469 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 HAO2Q9NYQ3 351 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 ONECUT1Q9UBC0 465 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 ATPIF1Q9UII2 106 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 LAMP5Q9UJQ1 280 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 HSPE1-MOB4S4R3N1 261 aa7.54□□□□□ -1.2
SSH1-205ENST00000546812 A0A1W2PRD5 423 aa7.53□□□□□ -1.2
SSH1-205ENST00000546812 A0A1W2PRF3 423 aa7.53□□□□□ -1.2
SSH1-205ENST00000546812 A0A1W2PRM7 423 aa7.53□□□□□ -1.2
SSH1-205ENST00000546812 MEIOCA2RUB1 952 aa7.53□□□□□ -1.2
SSH1-205ENST00000546812 OOEPA6NGQ2 149 aa7.53□□□□□ -1.2
SSH1-205ENST00000546812 SNTNA6NMZ2 147 aa7.53□□□□□ -1.2
SSH1-205ENST00000546812 PSMD9O00233 223 aa7.53□□□□□ -1.2
SSH1-205ENST00000546812 LYNP07948 512 aa7.53□□□□□ -1.2
SSH1-205ENST00000546812 NHLRC4P0CG21 123 aaPredicted RBP7.53□□□□□ -1.2
SSH1-205ENST00000546812 MYF6P23409 242 aa7.53□□□□□ -1.2
SSH1-205ENST00000546812 SAA4P35542 130 aa7.53□□□□□ -1.2
SSH1-205ENST00000546812 ATP6V1E1P36543 226 aa7.53□□□□□ -1.2
SSH1-205ENST00000546812 PRB3Q04118 309 aaPredicted RBP7.53□□□□□ -1.2
SSH1-205ENST00000546812 ACSM1Q08AH1 577 aa7.53□□□□□ -1.2
SSH1-205ENST00000546812 POU4F2Q12837 409 aa7.53□□□□□ -1.2
SSH1-205ENST00000546812 TMED1Q13445 227 aa7.53□□□□□ -1.2
SSH1-205ENST00000546812 TAF13Q15543 124 aa7.53□□□□□ -1.2
SSH1-205ENST00000546812 LY6EQ16553 131 aa7.53□□□□□ -1.2
SSH1-205ENST00000546812 KRTAP27-1Q3LI81 207 aa7.53□□□□□ -1.2
SSH1-205ENST00000546812 PRAMEF6Q5VXH4 476 aa7.53□□□□□ -1.2
SSH1-205ENST00000546812 LAIR2Q6ISS4 152 aa7.53□□□□□ -1.2
SSH1-205ENST00000546812 CRIP3Q6Q6R5 217 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms