RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 NKX6-3A6NJ46 265 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 J3QT63 122 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 DENRO43583 198 aaKnown RBP14.69□□□□□ -0.06
CD9-211ENST00000546073 HCKP08631 526 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 PMELP40967 661 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 NPY4RP50391 375 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 GTF2A1P52655 376 aaPredicted RBP14.69□□□□□ -0.06
CD9-211ENST00000546073 DVL1P1P54792 670 aaPredicted RBP14.69□□□□□ -0.06
CD9-211ENST00000546073 MTCP1P56278 107 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 ZNF404Q494X3 552 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 YIF1BQ5BJH7 314 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 FAM76BQ5HYJ3 339 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 TMEM42Q69YG0 159 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 WDR82Q6UXN9 313 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 Q71RC1 249 aaPredicted RBP14.69□□□□□ -0.06
CD9-211ENST00000546073 MKXQ8IYA7 352 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 DNAAF1Q8NEP3 725 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 NPRL2Q8WTW4 380 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 HPSE2Q8WWQ2 592 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 C12orf43Q96C57 262 aaKnown RBP14.69□□□□□ -0.06
CD9-211ENST00000546073 ZNF649Q9BS31 505 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 YTHDF1Q9BYJ9 559 aaKnown RBP14.69□□□□□ -0.06
CD9-211ENST00000546073 SHARPINQ9H0F6 387 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 TLNRD1Q9H1K6 362 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 OR51I2Q9H344 312 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 LPAR2Q9HBW0 351 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 TMEM165Q9HC07 324 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 LPAR3Q9UBY5 353 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 CLN8Q9UBY8 286 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 LRCH1Q9Y2L9 728 aa14.69□□□□□ -0.06
CD9-211ENST00000546073 CEACAM18A8MTB9 384 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 E9PI62 339 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 OGG1O15527 345 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 ATF1P18846 271 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 CELP19835 753 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 RAB3AP20336 220 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 GATA3P23771 443 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 CRHBPP24387 322 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 MAPK3P27361 379 aaPredicted RBP14.68□□□□□ -0.06
CD9-211ENST00000546073 CD80P33681 288 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 GMFBP60983 142 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 LMO4P61968 165 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 BDH1Q02338 343 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 SPHARQ15513 63 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 CD276Q5ZPR3 534 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 PRSS48Q7RTY5 328 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 SVOPQ8N4V2 548 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 GHSRQ92847 366 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 TMEM186Q96B77 213 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 MED30Q96HR3 178 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 GPER1Q99527 375 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 TMEM246Q9BRR3 403 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 PKIBQ9C010 78 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 FKBP14Q9NWM8 211 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 DCAF16Q9NXF7 216 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 GLS2Q9UI32 602 aa14.68□□□□□ -0.06
CD9-211ENST00000546073 A0A0G2JMP0 313 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 A0A0X1KG70 313 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 PQLC2LA1A4F0 135 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 WNT9BO14905 357 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 AKR7A2O43488 359 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 ADAM20O43506 726 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 MRPS14O60783 128 aaKnown RBP14.67□□□□□ -0.06
CD9-211ENST00000546073 NXPH2O95156 264 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 HSMCR30P0CW71 290 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 AZGP1P25311 298 aaKnown RBP14.67□□□□□ -0.06
CD9-211ENST00000546073 SOX2P48431 317 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 PITPNBP48739 271 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 SLC35A2P78381 396 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 SCGB2A2Q13296 93 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 SMIM21Q3B7S5 101 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 LAIR2Q6ISS4 152 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 BTNL3Q6UXE8 466 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 Q8IYB0 196 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 MS4A15Q8N5U1 240 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 GCSAMQ8N6F7 178 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 OR4M2Q8NGB6 313 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 AQP3Q92482 292 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 UFD1Q92890 307 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 ADAT3Q96EY9 351 aaPredicted RBP14.67□□□□□ -0.06
CD9-211ENST00000546073 OPALINQ96PE5 141 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 S100A13Q99584 98 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 SSBP3Q9BWW4 388 aaPredicted RBP14.67□□□□□ -0.06
CD9-211ENST00000546073 BEX2Q9BXY8 128 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 DUSP21Q9H596 190 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 PPP1R3EQ9H7J1 279 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 CDC42EP3Q9UKI2 254 aa14.67□□□□□ -0.06
CD9-211ENST00000546073 PNMA8CA0A1B0GUJ8 204 aa14.66□□□□□ -0.06
CD9-211ENST00000546073 SRRM5B3KS81 715 aa14.66□□□□□ -0.06
CD9-211ENST00000546073 TRAPPC2LH3BP13 241 aa14.66□□□□□ -0.06
CD9-211ENST00000546073 TMPRSS2O15393 492 aa14.66□□□□□ -0.06
CD9-211ENST00000546073 SULT1B1O43704 296 aa14.66□□□□□ -0.06
CD9-211ENST00000546073 LHBP01229 141 aa14.66□□□□□ -0.06
CD9-211ENST00000546073 IL2RGP31785 369 aa14.66□□□□□ -0.06
CD9-211ENST00000546073 UBE2V2Q15819 145 aa14.66□□□□□ -0.06
CD9-211ENST00000546073 DMRTC1Q5HYR2 192 aa14.66□□□□□ -0.06
CD9-211ENST00000546073 DCAF12L2Q5VW00 463 aa14.66□□□□□ -0.06
CD9-211ENST00000546073 TEX36Q5VZQ5 186 aa14.66□□□□□ -0.06
CD9-211ENST00000546073 FAHD2BQ6P2I3 314 aaPredicted RBP14.66□□□□□ -0.06
CD9-211ENST00000546073 WDR86Q86TI4 376 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms