RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 LINC00299Q6ZSB3 139 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 Q8IYB0 196 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 OR52N4Q8NGI2 321 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 NEUROG1Q92886 237 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 CMTM3Q96MX0 182 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 GPER1Q99527 375 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 IL36GQ9NZH8 169 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 MYEF2Q9P2K5 600 aaKnown RBP13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 CHD3Q12873 2000 aaKnown RBP13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 CACNA1DQ01668 2161 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 A0A0G2JK05 382 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 A6NIN4 97 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 ZNF732B4DXR9 585 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 J3QT63 122 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 LILRA1O75019 489 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 BPNT1O95861 308 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 IGHV1-46P01743 117 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 CALCBP10092 127 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 NAT2P11245 290 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 HTR2CP28335 458 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 CFHR2P36980 270 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 PRSS12P56730 875 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 MRPS11P82912 194 aaKnown RBP13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 IL24Q13007 206 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 ZNF181Q2M3W8 571 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 ASCL4Q6XD76 172 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 MKXQ8IYA7 352 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 JAGN1Q8N5M9 183 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 OR2Z1Q8NG97 314 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 OR10Z1Q8NGY1 313 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 NDNFQ8TB73 568 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 TBC1D15Q8TC07 691 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 Q8TCH9 128 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 NEU4Q8WWR8 484 aaPredicted RBP13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 HPS1Q92902 700 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 PTX4Q96A99 478 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 S100A13Q99584 98 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 RAB1BQ9H0U4 201 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 OR51I2Q9H344 312 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 RNF167Q9H6Y7 350 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 PLEKHF2Q9H8W4 249 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 PLGRKTQ9HBL7 147 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 MSL2Q9HCI7 577 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 FBLN5Q9UBX5 448 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 STEAP1Q9UHE8 339 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 AK6Q9Y3D8 172 aaKnown RBP13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 ETV7Q9Y603 341 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 UNC79Q9P2D8 2635 aa13.61□□□□□ -0.23
PRPF40A-212ENST00000545856 A0A075B6Q4 140 aa13.6□□□□□ -0.23
PRPF40A-212ENST00000545856 GPM6AP51674 278 aa13.6□□□□□ -0.23
PRPF40A-212ENST00000545856 RAB11BQ15907 218 aa13.6□□□□□ -0.23
PRPF40A-212ENST00000545856 MRPS24Q96EL2 167 aaKnown RBP13.6□□□□□ -0.23
PRPF40A-212ENST00000545856 MEGF10Q96KG7 1140 aa13.6□□□□□ -0.23
PRPF40A-212ENST00000545856 FN3KRPQ9HA64 309 aa13.6□□□□□ -0.23
PRPF40A-212ENST00000545856 PTTG2Q9NZH5 202 aa13.6□□□□□ -0.23
PRPF40A-212ENST00000545856 FAM230AA0A1W2PPH8 454 aa13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 A0A1W2PPR1 153 aa13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 H3BUI4 141 aa13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 NOS1APO75052 506 aaPredicted RBP13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 PTGFRP43088 359 aa13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 ZP1P60852 638 aa13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 TNFAIP6P98066 277 aaPredicted RBP13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 MXD1Q05195 221 aa13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 PDZK1IP1Q13113 114 aa13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 HNRNPA0Q13151 305 aaKnown RBP13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 MZT2AQ6P582 158 aa13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 OR2W3Q7Z3T1 314 aa13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 CDH24Q86UP0 819 aa13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 OR10AD1Q8NGE0 317 aa13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 ZNF671Q8TAW3 534 aa13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 ORAI1Q96D31 301 aa13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 OR2V2Q96R30 315 aa13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 CST11Q9H112 138 aa13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 UBTD1Q9HAC8 227 aa13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 ABCA12Q86UK0 2595 aa13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 ANKRD17O75179 2603 aaKnown RBP13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 SPG11Q96JI7 2443 aa13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 LRBAP50851 2863 aa13.59□□□□□ -0.23
PRPF40A-212ENST00000545856 SCGNO76038 276 aa13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 FSTL3O95633 263 aa13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 THBS2P35442 1172 aa13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 HAAOP46952 286 aa13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 ZNF154Q13106 437 aa13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 MAB21L1Q13394 359 aa13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 ZNF295-AS1Q8N0V1 137 aa13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 Q8NFD4 153 aa13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 TRMT10AQ8TBZ6 339 aaKnown RBP13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 TNFAIP8L1Q8WVP5 186 aa13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 IGFBPL1Q8WX77 278 aa13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 GFI1Q99684 422 aa13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 NXF2Q9GZY0 626 aaKnown RBP13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 MMP27Q9H306 513 aa13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 CXorf56Q9H5V9 222 aa13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 CNTD2Q9H8S5 307 aa13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 SAP30LQ9HAJ7 183 aa13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 MYOZ1Q9NP98 299 aaPredicted RBP13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 DECR2Q9NUI1 292 aa13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 MRPS28Q9Y2Q9 187 aaKnown RBP13.58□□□□□ -0.23
PRPF40A-212ENST00000545856 AKAP6Q13023 2319 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 CRYBG3Q68DQ2 2970 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms