RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 FBXO4Q9UKT5 387 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 RNF24Q9Y225 148 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 OR2W5A6NFC9 320 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 FAM157BP0CG42 384 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 AVPR2P30518 371 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 P2RX3P56373 397 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 LSM6P62312 80 aaKnown RBP11.17□□□□□ -0.62
COL4A6-209ENST00000545689 NCR3LG1Q68D85 454 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 KISS1RQ969F8 398 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-209ENST00000545689 KIAA1217Q5T5P2 1943 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 PPP1R1AQ13522 171 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 OR4D11Q8NGI4 311 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 NAA60Q9H7X0 242 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 FLRT3Q9NZU0 649 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 IFI6P09912 130 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 HOXB3P14651 431 aaPredicted RBP11.16□□□□□ -0.62
COL4A6-209ENST00000545689 KIR2DS2P43631 304 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 C17orf107Q6ZR85 190 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 CCDC71Q8IV32 467 aaPredicted RBP11.16□□□□□ -0.62
COL4A6-209ENST00000545689 FAM58AQ8N1B3 248 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 BSCL2Q96G97 398 aaPredicted RBP11.16□□□□□ -0.62
COL4A6-209ENST00000545689 WBP1LQ9NX94 342 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 TRGV5A0A0B4J1U4 118 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 SFTA3P0C7M3 94 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 PJVKQ0ZLH3 352 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 INSL4Q14641 139 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 TCTN1Q2MV58 587 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 NXF2Q9GZY0 626 aaKnown RBP11.16□□□□□ -0.62
COL4A6-209ENST00000545689 CYR61O00622 381 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 CRYABP02511 175 aaKnown RBP11.16□□□□□ -0.62
COL4A6-209ENST00000545689 CALCRP30988 508 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 COL13A1Q5TAT6 717 aaPredicted RBP11.16□□□□□ -0.62
COL4A6-209ENST00000545689 ZNF468Q5VIY5 522 aaPredicted RBP11.16□□□□□ -0.62
COL4A6-209ENST00000545689 RXFP4Q8TDU9 374 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 ZNF426Q9BUY5 554 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 MICAL3Q7RTP6 2002 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 PDCD6O75340 191 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 FGF7P21781 194 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 DVL1P1P54792 670 aaPredicted RBP11.16□□□□□ -0.62
COL4A6-209ENST00000545689 PSG6Q00889 435 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 ARL16Q0P5N6 197 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 GGTLC2Q14390 218 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 GUSBP11Q6P575 273 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 RPS4Y2Q8TD47 263 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 CABLES2Q9BTV7 478 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 RGS13O14921 159 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 CT45A10P0DMU9 189 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 HES1Q14469 280 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 ST6GAL2Q96JF0 529 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 ADAT1Q9BUB4 502 aaKnown RBP11.16□□□□□ -0.62
COL4A6-209ENST00000545689 NMES1Q9C002 83 aa11.16□□□□□ -0.62
COL4A6-209ENST00000545689 ATAD5Q96QE3 1844 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 TRGV10A0A0A0MS01 117 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 SLC25A6P12236 298 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 CTLA4P16410 223 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 MESTQ5EB52 335 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 OTPQ5XKR4 325 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 PWWP2BQ6NUJ5 590 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 MOGAT1Q96PD6 335 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 ABHD1Q96SE0 405 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 ZFP64Q9NPA5 681 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 NIT2Q9NQR4 276 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 RER1O15258 196 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 ZBTB25P24278 435 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 MVDP53602 400 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 CNTD2Q9H8S5 307 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 SLC35D1Q9NTN3 355 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 YBX2Q9Y2T7 364 aaKnown RBP11.15□□□□□ -0.62
COL4A6-209ENST00000545689 TRAV17A0A0B4J275 112 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 MBTPS2O43462 519 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 MPC2O95563 127 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 GPANK1O95872 356 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 CTSDP07339 412 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-209ENST00000545689 CBR1P16152 277 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 DUSP2Q05923 314 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 WIPI1Q5MNZ9 446 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-209ENST00000545689 ZNF705AQ6ZN79 300 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-209ENST00000545689 HSD17B13Q7Z5P4 300 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-209ENST00000545689 OR5B21A6NL26 309 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 GLI4P10075 376 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 RAB5AP20339 215 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 FZD5Q13467 585 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 ZNF770Q6IQ21 691 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-209ENST00000545689 D2HGDHQ8N465 521 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 MAGT1Q9H0U3 335 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 MIXL1Q9H2W2 232 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 TAAR3PQ9P1P4 343 aa11.15□□□□□ -0.62
COL4A6-209ENST00000545689 TO15178 435 aa11.15□□□□□ -0.63
COL4A6-209ENST00000545689 B3GNTL1Q67FW5 361 aaPredicted RBP11.15□□□□□ -0.63
COL4A6-209ENST00000545689 SP7Q8TDD2 431 aaPredicted RBP11.15□□□□□ -0.63
COL4A6-209ENST00000545689 ARRDC1-AS1Q9H2J1 176 aa11.15□□□□□ -0.63
COL4A6-209ENST00000545689 ANGPTL7O43827 346 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 C1QTNF6Q9BXI9 259 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 C3orf85A0A1B0GTC6 90 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 PRDX4Q13162 271 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 SKP2Q13309 424 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 GUK1Q16774 197 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 SSX9Q7RTT3 188 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 POM121L2Q96KW2 1035 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 P4HTMQ9NXG6 502 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms