RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 UBE2CO00762 179 aa16.52■□□□□ 0.24
MSLN-202ENST00000545450 SOCS1O15524 211 aa16.52■□□□□ 0.24
MSLN-202ENST00000545450 SERPINA5P05154 406 aa16.52■□□□□ 0.24
MSLN-202ENST00000545450 RPS2P15880 293 aaKnown RBP16.52■□□□□ 0.24
MSLN-202ENST00000545450 CD80P33681 288 aa16.52■□□□□ 0.24
MSLN-202ENST00000545450 TMEM50BP56557 158 aa16.52■□□□□ 0.24
MSLN-202ENST00000545450 RNF212Q495C1 297 aa16.52■□□□□ 0.24
MSLN-202ENST00000545450 C5orf46Q6UWT4 87 aa16.52■□□□□ 0.24
MSLN-202ENST00000545450 SLAMF6Q96DU3 332 aa16.52■□□□□ 0.24
MSLN-202ENST00000545450 ZNF160Q9HCG1 818 aa16.52■□□□□ 0.24
MSLN-202ENST00000545450 CACFD1Q9UGQ2 172 aa16.52■□□□□ 0.24
MSLN-202ENST00000545450 C1orf196B1AJZ1 125 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 LINC00587B1AMM8 73 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 RAD51DO75771 328 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 HKR1P10072 659 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 NME2P22392 152 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 DAP3P51398 398 aaKnown RBP16.51■□□□□ 0.23
MSLN-202ENST00000545450 DVL1P1P54792 670 aaPredicted RBP16.51■□□□□ 0.23
MSLN-202ENST00000545450 HGFACQ04756 655 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 AADACL3Q5VUY0 350 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 KLHL24Q6TFL4 600 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 GLIPR1L1Q6UWM5 242 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 OR6S1Q8NH40 331 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 M1APQ8TC57 530 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 HIST1H2BAQ96A08 127 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 C14orf79Q96F83 325 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 KIRREL1Q96J84 757 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 CLCC1Q96S66 551 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 PLA2G2EQ9NZK7 142 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 MRPS28Q9Y2Q9 187 aaKnown RBP16.51■□□□□ 0.23
MSLN-202ENST00000545450 NSG1A0A0A6YYJ2 146 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 NPIPA5E9PKD4 350 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 ZNF44P15621 663 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 RCC1P18754 421 aaPredicted RBP16.51■□□□□ 0.23
MSLN-202ENST00000545450 NUBP1P53384 320 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 HES3Q5TGS1 186 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 TMEM268Q5VZI3 342 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 PPP1R32Q7Z5V6 425 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 OR5H2Q8NGV7 314 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 OR13G1Q8NGZ3 307 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 LYPD6BQ8NI32 183 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 KCNG3Q8TAE7 436 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 TMEM41AQ96HV5 264 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 METTL7AQ9H8H3 244 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 NPIPA1Q9UND3 350 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 OSGIN2Q9Y236 505 aa16.51■□□□□ 0.23
MSLN-202ENST00000545450 CCDC187A0A096LP49 1063 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 NPIPB13A6NJU9 1138 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 NPIPB4C9JG80 1138 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 SGCEO43556 437 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 CDC14BO60729 498 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 MPIG6BO95866 241 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 CST4P01036 141 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 NSUN5P2Q63ZY6 315 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 OR10S1Q8NGN2 331 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 C11orf40Q8WZ69 217 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 ZNF251Q9BRH9 671 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 FIGNL2A6NMB9 653 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 AGPAT2O15120 278 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 FABP1P07148 127 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 ADH6P28332 368 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 OTX2P32243 289 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 P2RY4P51582 365 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 SUMO3P55854 103 aaPredicted RBP16.5■□□□□ 0.23
MSLN-202ENST00000545450 SMCO1Q147U7 214 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 EIF2S3LQ2VIR3 472 aaKnown RBP16.5■□□□□ 0.23
MSLN-202ENST00000545450 RBMS3Q6XE24 437 aaKnown RBP16.5■□□□□ 0.23
MSLN-202ENST00000545450 ETV3LQ6ZN32 361 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 FAM219AQ8IW50 185 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 OR5AS1Q8N127 324 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 SPACA5Q96QH8 159 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 PPP4R1LQ9P1A2 415 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 VDAC3Q9Y277 283 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 KPTNQ9Y664 436 aa16.5■□□□□ 0.23
MSLN-202ENST00000545450 PRR33A8MZF0 331 aa16.49■□□□□ 0.23
MSLN-202ENST00000545450 IGHEP01854 428 aa16.49■□□□□ 0.23
MSLN-202ENST00000545450 SLC16A13Q7RTY0 426 aa16.49■□□□□ 0.23
MSLN-202ENST00000545450 TMEM234Q8WY98 164 aa16.49■□□□□ 0.23
MSLN-202ENST00000545450 ST8SIA1Q92185 356 aa16.49■□□□□ 0.23
MSLN-202ENST00000545450 SEBOXQ9HB31 216 aaPredicted RBP16.49■□□□□ 0.23
MSLN-202ENST00000545450 GSN-AS1Q9NRJ2 163 aa16.49■□□□□ 0.23
MSLN-202ENST00000545450 GSKIPQ9P0R6 139 aa16.49■□□□□ 0.23
MSLN-202ENST00000545450 CHCHD2Q9Y6H1 151 aaPredicted RBP16.49■□□□□ 0.23
MSLN-202ENST00000545450 DOCK10Q96BY6 2186 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 MT-ND4LP03901 98 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 S100A9P06702 114 aaKnown RBP16.48■□□□□ 0.23
MSLN-202ENST00000545450 CD63P08962 238 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 ZNF20P17024 532 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 AGAP20933 346 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 GLRA1P23415 457 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 CPT2P23786 658 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 S100A10P60903 97 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 HMGN3Q15651 99 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 H1FNTQ75WM6 255 aaPredicted RBP16.48■□□□□ 0.23
MSLN-202ENST00000545450 ZNF561Q8N587 486 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 OR51E1Q8TCB6 317 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 CYYR1Q96J86 154 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 AKR1E2Q96JD6 320 aa16.48■□□□□ 0.23
MSLN-202ENST00000545450 TMEM59Q9BXS4 323 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms