RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 TMEM178BH3BS89 294 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 J3QT63 122 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 CCRL2O00421 344 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 AKR7A2O43488 359 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 SULT1B1O43704 296 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 RP2O75695 350 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 RGS9O75916 674 aaPredicted RBP5.32□□□□□ -1.56
LTBR-212ENST00000543542 NXPH2O95156 264 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 MAS1P04201 325 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 CD1AP06126 327 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 TMEM225BP0DP42 221 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 CPEP16870 476 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 GLRA1P23415 457 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 PSMA1P25786 263 aaKnown RBP5.32□□□□□ -1.56
LTBR-212ENST00000543542 GIFP27352 417 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 TGFBR2P37173 567 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 RBMXP38159 391 aaKnown RBP5.32□□□□□ -1.56
LTBR-212ENST00000543542 MDH2P40926 338 aaKnown RBP5.32□□□□□ -1.56
LTBR-212ENST00000543542 PMELP40967 661 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 RPS25P62851 125 aaKnown RBP5.32□□□□□ -1.56
LTBR-212ENST00000543542 HNRNPA0Q13151 305 aaKnown RBP5.32□□□□□ -1.56
LTBR-212ENST00000543542 GPR50Q13585 617 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 TPBGQ13641 420 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 RIN1Q13671 783 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 KCNJ8Q15842 424 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 MICBQ29980 383 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 ZNF181Q2M3W8 571 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 ACSM3Q53FZ2 586 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 FAM201AQ5SY85 155 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 TMEM42Q69YG0 159 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 SFRP4Q6FHJ7 346 aaPredicted RBP5.32□□□□□ -1.56
LTBR-212ENST00000543542 SPNS3Q6ZMD2 512 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 Q6ZSR3 168 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 UTS2BQ765I0 119 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 CEACAM19Q7Z692 300 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 WDR86Q86TI4 376 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 ANGPTL5Q86XS5 388 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 KRTAP1-3Q8IUG1 177 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 MKXQ8IYA7 352 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 BATF2Q8N1L9 274 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 SPICQ8N5J4 248 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 PARP16Q8N5Y8 322 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 PNLDC1Q8NA58 520 aaKnown RBP5.32□□□□□ -1.56
LTBR-212ENST00000543542 Q8TCH9 128 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 RPS4Y2Q8TD47 263 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 RGP1Q92546 391 aaPredicted RBP5.32□□□□□ -1.56
LTBR-212ENST00000543542 SPSB1Q96BD6 273 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 TMIGD2Q96BF3 282 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 RAB39BQ96DA2 213 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 C18orf12Q96KH6 178 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 PGLYRP3Q96LB9 341 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 SPACA5Q96QH8 159 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 S100A13Q99584 98 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 OR51I2Q9H344 312 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 METTL17Q9H7H0 456 aaPredicted RBP5.32□□□□□ -1.56
LTBR-212ENST00000543542 ELL3Q9HB65 397 aaPredicted RBP5.32□□□□□ -1.56
LTBR-212ENST00000543542 TCF7L1Q9HCS4 588 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 EXOSC4Q9NPD3 245 aaKnown RBP5.32□□□□□ -1.56
LTBR-212ENST00000543542 DCAF16Q9NXF7 216 aa5.32□□□□□ -1.56
LTBR-212ENST00000543542 FLNBO75369 2602 aaKnown RBP5.32□□□□□ -1.56
LTBR-212ENST00000543542 USF3Q68DE3 2245 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 IGHV4-61A0A0C4DH41 118 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 TRBV5-5A0A0J9YX44 114 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 OOEPA6NGQ2 149 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 NKX6-3A6NJ46 265 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 VWC2LB2RUY7 222 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 LGALS8O00214 317 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 SPRY1O43609 319 aaPredicted RBP5.31□□□□□ -1.56
LTBR-212ENST00000543542 SYNGR1O43759 233 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 RHBDL1O75783 438 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 IGHV2-70P01814 119 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 GYPAP02724 150 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 RPS2P15880 293 aaKnown RBP5.31□□□□□ -1.56
LTBR-212ENST00000543542 BDKRB2P30411 391 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 GABRA5P31644 462 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 GABRA2P47869 451 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 LOXL1Q08397 574 aaPredicted RBP5.31□□□□□ -1.56
LTBR-212ENST00000543542 DOC2BQ14184 412 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 ZMYND11Q15326 602 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 HSD17B12Q53GQ0 312 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 DDI2Q5TDH0 399 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 UBE2UQ5VVX9 321 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 FIP1L1Q6UN15 594 aaKnown RBP5.31□□□□□ -1.56
LTBR-212ENST00000543542 WDR82Q6UXN9 313 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 DNM1P46Q6ZS02 220 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 SLC25A26Q70HW3 274 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 NLRC3Q7RTR2 1065 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 KRT74Q7RTS7 529 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 CALHM1Q8IU99 346 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 PHC2Q8IXK0 858 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 CIARTQ8N365 385 aaPredicted RBP5.31□□□□□ -1.56
LTBR-212ENST00000543542 JAGN1Q8N5M9 183 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 GCSAMQ8N6F7 178 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 DNAAF1Q8NEP3 725 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 OR5T2Q8NGG2 359 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 OR5D18Q8NGL1 313 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 OR10Z1Q8NGY1 313 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 CLDND2Q8NHS1 167 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 AQP3Q92482 292 aa5.31□□□□□ -1.56
LTBR-212ENST00000543542 SLAMF9Q96A28 289 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms