RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 LIX1LQ8IVB5 337 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 PAQR4Q8N4S7 273 aaPredicted RBP8.06□□□□□ -1.12
GNE-206ENST00000543356 NAXEQ8NCW5 288 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 FCAMRQ8WWV6 532 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 SPACA5Q96QH8 159 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 GPER1Q99527 375 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 C7orf50Q9BRJ6 194 aaKnown RBP8.06□□□□□ -1.12
GNE-206ENST00000543356 MS4A7Q9GZW8 240 aaPredicted RBP8.06□□□□□ -1.12
GNE-206ENST00000543356 OPN3Q9H1Y3 402 aaPredicted RBP8.06□□□□□ -1.12
GNE-206ENST00000543356 AUNIPQ9H7T9 357 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 GPR173Q9NS66 373 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 RBFOX1Q9NWB1 397 aaKnown RBP8.06□□□□□ -1.12
GNE-206ENST00000543356 APC2O95996 2303 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 METTL21EPA6NDL7 271 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 PRRG2O14669 202 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 GMDSO60547 372 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 GLI4P10075 376 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 CBR1P16152 277 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 ERP29P30040 261 aaKnown RBP8.06□□□□□ -1.12
GNE-206ENST00000543356 RELQ04864 619 aaPredicted RBP8.06□□□□□ -1.12
GNE-206ENST00000543356 MRPL49Q13405 166 aaKnown RBP8.06□□□□□ -1.12
GNE-206ENST00000543356 GK2Q14410 553 aaPredicted RBP8.06□□□□□ -1.12
GNE-206ENST00000543356 RAB12Q6IQ22 244 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 LHFPL2Q6ZUX7 228 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 MRPL21Q7Z2W9 205 aaKnown RBP8.06□□□□□ -1.12
GNE-206ENST00000543356 RNF144BQ7Z419 303 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 COMMD7Q86VX2 200 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 CXorf67Q86X51 503 aaPredicted RBP8.06□□□□□ -1.12
GNE-206ENST00000543356 RPRMLQ8N4K4 120 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 WDR31Q8NA23 367 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 OR52I2Q8NH67 350 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 PIGTQ969N2 578 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 MS4A3Q96HJ5 214 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 SPENQ96T58 3664 aaKnown RBP8.05□□□□□ -1.12
GNE-206ENST00000543356 A0A0B4J293 547 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 C1QTNF9BB2RNN3 333 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 SMLR1H3BR10 107 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 KDM4BO94953 1096 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 ECDO95905 644 aaPredicted RBP8.05□□□□□ -1.12
GNE-206ENST00000543356 NRASP01111 189 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 IGKV3-15P01624 115 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 C1QTNF9P0C862 333 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 FAM157BP0CG42 384 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 TRAPPC2P0DI81 140 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 TRAPPC2BP0DI82 140 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 GDNFP39905 211 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 DYRK1AQ13627 763 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 KLF9Q13886 244 aaPredicted RBP8.05□□□□□ -1.12
GNE-206ENST00000543356 FAM189A2Q15884 450 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 OR10K2Q6IF99 312 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 UNQ6494/PRO21346Q6UXR6 183 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 GFRALQ6UXV0 394 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 BHLHA15Q7RTS1 189 aaPredicted RBP8.05□□□□□ -1.12
GNE-206ENST00000543356 TOMM5Q8N4H5 51 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 CSNK2A3Q8NEV1 391 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 OR5L1Q8NGL2 311 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 KCNG3Q8TAE7 436 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 ENKURQ8TC29 256 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 FAM46BQ96A09 425 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 SNRNP40Q96DI7 357 aaKnown RBP8.05□□□□□ -1.12
GNE-206ENST00000543356 PTTG3PQ9NZH4 202 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 AMDHD2Q9Y303 409 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 STARD10Q9Y365 291 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 TRAV18A0A075B6X5 111 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 SULT1C2O00338 296 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 ORC5O43913 435 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 CST4P01036 141 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 RAC2P15153 192 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 PTGFRP43088 359 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 HOXA1P49639 335 aaPredicted RBP8.05□□□□□ -1.12
GNE-206ENST00000543356 ZP1P60852 638 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 SSTP61278 116 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 BAMBIQ13145 260 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 GPR176Q14439 515 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 RNASE12Q5GAN4 147 aaKnown RBP8.05□□□□□ -1.12
GNE-206ENST00000543356 DOLPP1Q86YN1 238 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 ZNF101Q8IZC7 436 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 FAM169BQ8N8A8 192 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 DUSP18Q8NEJ0 188 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 OR8H1Q8NGG4 311 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 NPRL2Q8WTW4 380 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 ESRP2Q9H6T0 727 aaKnown RBP8.05□□□□□ -1.12
GNE-206ENST00000543356 HSPB11Q9Y547 144 aa8.05□□□□□ -1.12
GNE-206ENST00000543356 ANKRD11Q6UB99 2663 aaPredicted RBP8.05□□□□□ -1.12
GNE-206ENST00000543356 CDC14BO60729 498 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 NGFP01138 241 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 CELA3BP08861 270 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 KIR2DL3P43628 341 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 FUT6P51993 359 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 AP3S2P59780 193 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 SSBP1Q04837 148 aaKnown RBP8.04□□□□□ -1.12
GNE-206ENST00000543356 TSC22D1Q15714 1073 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 ANKRD39Q53RE8 183 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 MYPOPQ86VE0 399 aaPredicted RBP8.04□□□□□ -1.12
GNE-206ENST00000543356 FTMTQ8N4E7 242 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 OR56B2PQ8NGI1 322 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 TNFAIP8L1Q8WVP5 186 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 ZCCHC14Q8WYQ9 949 aaKnown RBP8.04□□□□□ -1.12
GNE-206ENST00000543356 GCDHQ92947 438 aaPredicted RBP8.04□□□□□ -1.12
GNE-206ENST00000543356 CST11Q9H112 138 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms