RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 LYZL4Q96KX0 146 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 FAM212BQ9NTI7 297 aaPredicted RBP11.34□□□□□ -0.59
DDX11-223ENST00000542838 TUBD1Q9UJT1 453 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 MCTS1Q9ULC4 181 aaKnown RBP11.34□□□□□ -0.59
DDX11-223ENST00000542838 A0A1W2PR77 199 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 SHISA7A6NL88 538 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 ZNF726A6NNF4 738 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 DHRS7CA6NNS2 312 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 LMO7DNF2Z398 122 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 M0R036 132 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 S100A8P05109 93 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 CTSDP07339 412 aaPredicted RBP11.34□□□□□ -0.59
DDX11-223ENST00000542838 NAT2P11245 290 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 ZNF43P17038 809 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 GABRR1P24046 479 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 THBS4P35443 961 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 SNCAP37840 140 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 ECI1P42126 302 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 ZNF616Q08AN1 781 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 RNF212Q495C1 297 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 OGFOD3Q6PK18 319 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 PLXDC1Q8IUK5 500 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 ZNF561Q8N587 486 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 OR6X1Q8NH79 312 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 FGF21Q9NSA1 209 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 IGHV1OR15-9A0A0B4J2B8 117 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 TRBV11-1A0A0K0K1C0 115 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 RAMP1O60894 148 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 MT-ND4LP03901 98 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 SMIM6P0DI80 62 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 TGIF1Q15583 401 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 UBE2V2Q15819 145 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 KRBOX4Q5JUW0 171 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 ANKRD37Q7Z713 158 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 UBAC2Q8NBM4 344 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 ISOC2Q96AB3 205 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 FBXO17Q96EF6 278 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 HDHD3Q9BSH5 251 aaPredicted RBP11.34□□□□□ -0.59
DDX11-223ENST00000542838 ZNF160Q9HCG1 818 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 PLEKHJ1Q9NW61 149 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 STARD10Q9Y365 291 aa11.34□□□□□ -0.59
DDX11-223ENST00000542838 NCOA6Q14686 2063 aaPredicted RBP11.33□□□□□ -0.6
DDX11-223ENST00000542838 C7orf77A4D0Y5 90 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 CRYM-AS1A6NIL9 109 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 F5H5K5 113 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 UBE2CO00762 179 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 FAHP16930 419 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 ALDH3B1P43353 468 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 ARL6IP1Q15041 203 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 GUK1Q16774 197 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 ADPRHL1Q8NDY3 354 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 PIGTQ969N2 578 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 BSCL2Q96G97 398 aaPredicted RBP11.33□□□□□ -0.6
DDX11-223ENST00000542838 OXGR1Q96P68 337 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 IP6K3Q96PC2 410 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 C20orf24Q9BUV8 137 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 TM2D1Q9BX74 207 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 EIF5A2Q9GZV4 153 aaKnown RBP11.33□□□□□ -0.6
DDX11-223ENST00000542838 PLEKHA2Q9HB19 425 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 SPACA1Q9HBV2 294 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 PADI1Q9ULC6 663 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 RTTNQ86VV8 2226 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 A0A1W2PPE3 182 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 LINC00587B1AMM8 73 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 ETV2O00321 342 aaPredicted RBP11.33□□□□□ -0.6
DDX11-223ENST00000542838 DUX1O43812 170 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 ZNF14P17017 642 aaPredicted RBP11.33□□□□□ -0.6
DDX11-223ENST00000542838 CD27P26842 260 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 SFTPDP35247 375 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 HNRNPKP61978 463 aaKnown RBP eCLIP11.33□□□□□ -0.6
DDX11-223ENST00000542838 KCNMB1Q16558 191 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 SLC25A53Q5H9E4 307 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 FAM69BQ5VUD6 431 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 RTL6Q6ICC9 239 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 NFAM1Q8NET5 270 aaPredicted RBP11.33□□□□□ -0.6
DDX11-223ENST00000542838 ZNF501Q96CX3 271 aaPredicted RBP11.33□□□□□ -0.6
DDX11-223ENST00000542838 METTL7AQ9H8H3 244 aa11.33□□□□□ -0.6
DDX11-223ENST00000542838 MED12Q93074 2177 aa11.32□□□□□ -0.6
DDX11-223ENST00000542838 A6NLC8 198 aa11.32□□□□□ -0.6
DDX11-223ENST00000542838 FABP1P07148 127 aa11.32□□□□□ -0.6
DDX11-223ENST00000542838 HEXBP07686 556 aa11.32□□□□□ -0.6
DDX11-223ENST00000542838 DAOP14920 347 aa11.32□□□□□ -0.6
DDX11-223ENST00000542838 KLK2P20151 261 aa11.32□□□□□ -0.6
DDX11-223ENST00000542838 MSX1P28360 303 aa11.32□□□□□ -0.6
DDX11-223ENST00000542838 TSC22D1Q15714 1073 aa11.32□□□□□ -0.6
DDX11-223ENST00000542838 A0A1W2PPH5 198 aa11.32□□□□□ -0.6
DDX11-223ENST00000542838 RRP8O43159 456 aaKnown RBP11.32□□□□□ -0.6
DDX11-223ENST00000542838 TMEM225BP0DP42 221 aa11.32□□□□□ -0.6
DDX11-223ENST00000542838 MYF5P13349 255 aa11.32□□□□□ -0.6
DDX11-223ENST00000542838 AGAP20933 346 aa11.32□□□□□ -0.6
DDX11-223ENST00000542838 CAMLGP49069 296 aa11.32□□□□□ -0.6
DDX11-223ENST00000542838 FABP9Q0Z7S8 132 aa11.32□□□□□ -0.6
DDX11-223ENST00000542838 TOMM40LQ969M1 308 aa11.32□□□□□ -0.6
DDX11-223ENST00000542838 PIGLQ9Y2B2 252 aa11.32□□□□□ -0.6
DDX11-223ENST00000542838 E5RGE8 158 aa11.32□□□□□ -0.6
DDX11-223ENST00000542838 DHRS3O75911 302 aa11.32□□□□□ -0.6
DDX11-223ENST00000542838 MBPP02686 304 aaPredicted RBP11.32□□□□□ -0.6
DDX11-223ENST00000542838 DANCRP0C864 163 aa11.32□□□□□ -0.6
DDX11-223ENST00000542838 EIF3IQ13347 325 aaKnown RBP11.32□□□□□ -0.6
DDX11-223ENST00000542838 PPA1Q15181 289 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms